Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.45953	C81302	expressed sequence C81302	2		97011
Mm.45953	Snap25	synaptosomal-associated protein 25	2	2 F3 (2 78.2 cM)	20614
Gene Ontology	neurotransmitter secretion | neurotransmitter secretion | neurotransmitter uptake | plasma membrane | SNARE binding | synaptic transmission | synaptic vesicle docking | synaptosome
Human Homolog	SNAP25[synaptosomal-associated protein, 25kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 160 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AGGAACCAAA (3) CTGCAGCTGG (3) GGAGAAGGCT (5) TATATTAAAT (4) TGTTTTTTGT (3) 225 0.225 Cb medulloblastoma AAAAAAAAAA (2) AAAGAAGCAG (3) AGGAACCAAA (3) CTCAGTATTG (4) CTGCAGCTGG (3) GGAGAAGGCT (5) GGGAAGAAAA (3) TATATTAAAA (2) TATATTAAAT (4) TGTGTGATTT TGTTTTTGTT TGTTTTTTGT (3) 973.3 0.9733 P8 GC+1d culture AAAAAAAAAA (2) AGGAACCAAA (3) CTCAGTATTG (4) CTGTAATGAT (2) GCTGGCAGCT (2) GGAGAAGGCT (5) TATATTAAAT (4) TGTTTTTGTT TGTTTTTTGT (3) 247.6 0.2476 P8 GC+SHH+1d culture AAAAAAAAAA (2) AGGAACCAAA (3) CTGTAATGAT (2) GCTGGCAGCT (2) GGAGAAGGCT (5) TATATTAAAT (4) TGTTTTTGTT TGTTTTTTGT (3) 318.5 0.3185 3T3 fibroblasts AAAAAAAAAA (2) AAAGAAGCAG (3) GCTGGCAGCT (2) 45.5 0.0455 E15 cortex AAAAAAAAAA (2) GGAGAAGGCT (5) 217.7 0.2177 P1 cortex AAAAAAAAAA (2) AAAATAATTT (2) AAAGAAGCAA AGAACCTGGC (4) CTGTAATGAT (2) GCTGGCAGCT (2) TATATTAAAT (4) TGTTTTTGTT 290.6 0.2906 Hypothalamus AAAAAAAAAA (2) AAAATAATTT (2) AGGAACCAAA (3) CTCAGTATTG (4) CTGTAATGAT (2) GGAGAAGGCT (5) GGGAAGAAAA (3) TATATTAAAA (2) TATATTAAAT (4) TGTTTTTGTT TGTTTTTTGT (3) 306.2 0.3062 E12.5 retina AAAAAAAAAA (2) AAAGAAGCAG (3) GGAGAAAGGT (2) GGAGAAGGCT (5) TATATTAAAT (4) TGTTTTTGTT 154 0.154 E14.5 retina AAAAAAAAAA (2) AAAATAATTT (2) AAAGAAGCAA CTGTAATGAT (2) GGAGAAGGCT (5) TATATTAAAT (4) TGTTTTTGTT TGTTTTTTGT (3) 123.8 0.1238 E16.5 retina AAAAAAAAAA (2) GGAGAAGGCT (5) TATATTAAAT (4) TGTGTGATTT TGTTTTTTGT (3) 59.8 0.0598 E18.5 retina AAAAAAAAAA (2) AAAATAATTT (2) CTGTAATGAT (2) GCTGGCAGCT (2) GGAGAAGGCT (5) TATATTAAAA (2) TATATTAAAT (4) TGTGTGATTT TGTTTTTGTT 423.7 0.4237 P0.5 retina AAAAAAAAAA (2) AGGAACCAAA (3) CTGCAGCTGG (3) CTGTAATGAT (2) GGAGAAGGCT (5) TATATTAAAT (4) TGTTTTTTGT (3) 129.8 0.1298 P2.5 retina AAAAAAAAAA (2) AAAGAAGCAG (3) AGGAACCAAA (3) CTGTAATGAT (2) GGAGAAGGCT (5) TATATTAAAT (4) TGTTTTTGTT TGTTTTTTGT (3) 387.3 0.3873 P4.5 retina AAAAAAAAAA (2) AGGAACCAAA (3) CTGTAATGAT (2) GGAGAAGGCT (5) TATATTAAAT (4) TGTTTTTGTT TGTTTTTTGT (3) 332.9 0.3329 P6.5 retina AAAAAAAAAA (2) AGGAACCAAA (3) CTCAGTATTG (4) CTGTAATGAT (2) GAATTTACCT (2) GGAGAAGGCT (5) TATATTAAAA (2) TATATTAAAT (4) TGTGTGATTT TGTTTTTTGT (3) 355.3 0.3553 P10.5 crx- retina AAAAAAAAAA (2) AAAATAATTT (2) AAAGAAGCAG (3) AGGAACCAAA (3) CTGCAGCTGG (3) CTGTAATGAT (2) GGAGAAAGGT (2) GGAGAAGGCT (5) TATATTAAAT (4) TGTTTTTGTT TGTTTTTTGT (3) 102.5 0.1025 P10.5 crx+ retina AAAAAAAAAA (2) AAAGAAGCAA AGGAACCAAA (3) CTGCAGCTGG (3) GAATTTACCT (2) GGAGAAGGCT (5) TATATTAAAT (4) TGTTTTTGTT TGTTTTTTGT (3) 142.1 0.1421 Adult retinal AAAAAAAAAA (2) AGAACCTGGC (4) AGGAACCAAA (3) CTGCAGCTGG (3) CTGTAATGAT (2) GCTGGCAGCT (2) GGAGAAAGGT (2) TATATTAAAA (2) TATATTAAAT (4) TGTGTGATTT TGTTTTTGTT TGTTTTTTGT (3) 126.2 0.1262 ONL AAAAAAAAAA (2) AAAGAAGCAA AGGAACCAAA (3) CTGTAATGAT (2) GCTGGCAGCT (2) GGAGAAGGCT (5) TATATTAAAT (4) TGTTTTTGTT TGTTTTTTGT (3) 157 0.157