Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46044	Akap9	A kinase (PRKA) anchor protein (yotiao) 9	5		100986
Gene Ontology	cytoplasm | kinase activity | pericentriolar material | protein binding
Human Homolog	AKAP9[A kinase (PRKA) anchor protein (yotiao) 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGAGATAAT ATATTGAAGA ATGCCCAGTT GAGATAAATG TTTCTGCTTA (2) 19.5 0.0195 Cb medulloblastoma AAGCCGAGAT GTGTTTCCTT (2) TTTCTGCTTA (2) 9.2 0.0092 P8 GC+1d culture AGGAGATAAT ATATTGAAGA ATTTCTATGT GTGTTTCCTT (2) TTTCTGCTTA (2) 26.2 0.0262 P8 GC+SHH+1d culture AGAAATCAGG (2) AGGAGATAAT ATATTGAAGA ATTTCTATGT TATATTTGTG TTTCTGCTTA (2) 17.5 0.0175 3T3 fibroblasts GTGTTTCCTT (2) TTTCTGCTTA (2) 7 0.007 E15 cortex AAGCCGAGAT 9.9 0.0099 P1 cortex AAGCCGAGAT AGGAGATAAT ATATTGAAGA TTTCTGCTTA (2) 27.2 0.0272 Hypothalamus AGAAATCAGG (2) ATATTGAAGA 18.1 0.0181 E12.5 retina AAGCCGAGAT ATATTGAAGA ATTTCTATGT TATATTTGTG TTTCTGCTTA (2) 28.3 0.0283 E14.5 retina AGAAATCAGG (2) ATATTGAAGA GTGTTTCCTT (2) TTTCTGCTTA (2) TTTTTGCTTA (2) 12.7 0.0127 E16.5 retina ATATTGAAGA TATATTTGTG TTTCTGCTTA (2) 16.3 0.0163 E18.5 retina AGGAGATAAT ATATTGAAGA GTGTTTCCTT (2) TTTCTGCTTA (2) TTTTTGCTTA (2) 12.7 0.0127 P0.5 retina ATGCCCAGTT GAGATAAATG 4 0.004 P2.5 retina AGAAATCAGG (2) ATATTGAAGA TTTCTGCTTA (2) 12.3 0.0123 P4.5 retina ATATTGAAGA GAGATAAATG TTTCTGCTTA (2) 21.8 0.0218 P6.5 retina ATATTGAAGA CTGCCCTGCA (2) TATATTTGTG TTTCTGCTTA (2) TTTTTGCTTA (2) 20.1 0.0201 P10.5 crx- retina ATATTGAAGA TTTCTGCTTA (2) 11.2 0.0112 P10.5 crx+ retina ATATTGAAGA TTTTTGCTTA (2) 15.4 0.0154 Adult retinal ATATTGAAGA CTGCCCTGCA (2) 11.2 0.0112 ONL AGAAATCAGG (2) ATATTGAAGA ATGCCCAGTT GTGTTTCCTT (2) 19.1 0.0191