Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4857	Camk2b	calcium/calmodulin-dependent protein kinase II, beta	11	11 0.5 cM	12323
Gene Ontology	ATP binding | autophosphorylation | calcium ion transport | calcium/calmodulin-dependent protein kinase activity | calcium/calmodulin-dependent protein kinase complex | calmodulin binding | G1/S transition of mitotic cell cycle | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	CAMK2B[calcium/calmodulin-dependent protein kinase (CaM kinase) II beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GAAACAAAAA (9) 3.3 0.0033 P8 Cb GC CAAAAGAATT (4) 1.6 0.0016 P8 Cb GC TTGGGAAGGA (4) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CAAAAGAATT (4) 11.6 0.0116 Cb medulloblastoma TGGAAGGCCA (6) 4.6 0.0046 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture ACCCTCTAAA 6.8 0.0068 P8 GC+1d culture CAAAAGAATT (4) 3.4 0.0034 P8 GC+1d culture GCAGGGGAGG (2) 1.1 0.0011 P8 GC+1d culture TGGAAGGCCA (6) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CAAAAGAATT (4) 7 0.007 P8 GC+SHH+1d culture ACCCTCTAAA 2.3 0.0023 P8 GC+SHH+1d culture TTGGGAAGGA (4) 2.3 0.0023 P8 GC+SHH+1d culture GCAGGGGAGG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGTTTGTTT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTGTGTCTG (5) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CAGCTGGGGG 4.9 0.0049 E15 cortex TTTGTGTCTG (5) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex ACCCTCTAAA 9.1 0.0091 P1 cortex CAGCTGGGGG 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CAAAAGAATT (4) 3.6 0.0036 Hypothalamus GCAGGGGAGG (2) 3.6 0.0036 Hypothalamus TGGAAGGCCA (6) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CAGCTGGGGG 1.9 0.0019 E12.5 retina TTGGGAAGGA (4) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina CACTTTGCCC (4) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CAAAAGAATT (4) 3.6 0.0036 E16.5 retina ACCCTCTAAA 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CAAAAGAATT (4) 3.6 0.0036 E18.5 retina TTTGTGTCTG (5) 3.6 0.0036 E18.5 retina ACCCTCTAAA 1.8 0.0018 E18.5 retina CACTTTGCCC (4) 1.8 0.0018 E18.5 retina GCAGGGGAGG (2) 1.8 0.0018 E18.5 retina GGGGGCCAAA (5) 1.8 0.0018 E18.5 retina TTGGGAAGGA (4) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TGGAAGGCCA (6) 3.9 0.0039 P0.5 retina TTTGTGTCTG (5) 3.9 0.0039 P0.5 retina CAAAAGAATT (4) 2 0.002 P0.5 retina GGGTTTGTTT (3) 2 0.002 P0.5 retina TTGGGAAGGA (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CAAAAGAATT (4) 3.5 0.0035 P2.5 retina ACCCTCTAAA 1.8 0.0018 P2.5 retina GAAACAAAAA (9) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GCAGGGGAGG (2) 7.9 0.0079 P4.5 retina CAAAAGAATT (4) 5.9 0.0059 P4.5 retina GAAACAAAAA (9) 4 0.004 P4.5 retina GGGGGCCAAA (5) 2 0.002 P4.5 retina GGGTTTGTTT (3) 2 0.002 P4.5 retina TTTGTGTCTG (5) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CAAAAGAATT (4) 6.7 0.0067 P6.5 retina GCAGGGGAGG (2) 5 0.005 P6.5 retina TTGGGAAGGA (4) 3.3 0.0033 P6.5 retina ACCCTCTAAA 1.7 0.0017 P6.5 retina CACTTTGCCC (4) 1.7 0.0017 P6.5 retina GAAACAAAAA (9) 1.7 0.0017 P6.5 retina GGGTTTGTTT (3) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina ACCCTCTAAA 7.4 0.0074 P10.5 crx- retina GCAGGGGAGG (2) 3.7 0.0037 P10.5 crx- retina CAAAAGAATT (4) 1.9 0.0019 P10.5 crx- retina GGGTTTGTTT (3) 1.9 0.0019 P10.5 crx- retina TTTGTGTCTG (5) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GCAGGGGAGG (2) 5.8 0.0058 P10.5 crx+ retina CAAAAGAATT (4) 3.8 0.0038 P10.5 crx+ retina GGGGGCCAAA (5) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal ACCCTCTAAA 7.4 0.0074 Adult retinal CAAAAGAATT (4) 3.7 0.0037 Adult retinal GAAACAAAAA (9) 1.9 0.0019 Adult retinal GGGTTTGTTT (3) 1.9 0.0019 Adult retinal TGGAAGGCCA (6) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GAAACAAAAA (9) 3.8 0.0038 ONL ACCCTCTAAA 1.9 0.0019 ONL TGGAAGGCCA (6) 1.9 0.0019 ONL TTGGGAAGGA (4) 1.9 0.0019