Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.48795	1700094C10Rik	RIKEN cDNA 1700094C10 gene	5		74299
Mm.48795	1190009E20Rik	RIKEN cDNA 1190009E20 gene	5		68902
Mm.48795	1700112M01Rik	RIKEN cDNA 1700112M01 gene	5		71184
Mm.48795	Usp46	ubiquitin specific protease 46	5		69727
Gene Ontology	cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | ubiquitin thiolesterase activity | ubiquitin-dependent protein catabolism
Human Homolog	USP46[ubiquitin specific protease 46]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGCCTCCT (5) GGCCAGAGAC (4) TCAACAACAG (5) 6.5 0.0065 Cb medulloblastoma GATGGTGAAC (5) GGCCAGAGAC (4) 23.1 0.0231 P8 GC+1d culture CCTGCCTCCT (5) GGCCAGAGAC (4) 10.2 0.0102 P8 GC+SHH+1d culture AATATTAAAA (5) GGCCAGAGAC (4) 8.2 0.0082 3T3 fibroblasts GATGGTGAAC (5) 3.5 0.0035 E15 cortex CTACTGTAAC (4) 4.9 0.0049 P1 cortex CTACTGTAAC (4) 9.1 0.0091 Hypothalamus GGCCAGAGAC (4) 7.2 0.0072 E12.5 retina GATGGTGAAC (5) GGCCAGAGAC (4) 9.4 0.0094 E14.5 retina CCTGCCTCCT (5) GATGGTGAAC (5) GGCCAGAGAC (4) 7.2 0.0072 E16.5 retina GGCCAGAGAC (4) TCAACAACAG (5) 5.4 0.0054 E18.5 retina GGCCAGAGAC (4) 1.8 0.0018 P0.5 retina GGCCAGAGAC (4) 2 0.002 P2.5 retina GGCCAGAGAC (4) TCAACAACAG (5) 7.1 0.0071 P4.5 retina AATATTAAAA (5) 2 0.002 P6.5 retina GATGGTGAAC (5) GGCCAGAGAC (4) TCAACAACAG (5) 6.7 0.0067 P10.5 crx- retina GATGGTGAAC (5) GGCCAGAGAC (4) 5.6 0.0056 P10.5 crx+ retina GGCCAGAGAC (4) 3.8 0.0038 Adult retinal CCTGCCTCCT (5) GGCCAGAGAC (4) 5.6 0.0056 ONL GATGGTGAAC (5) 1.9 0.0019