Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4974	Ncam1	neural cell adhesion molecule 1	9	9 28.0 cM	17967
Gene Ontology	cell adhesion | extracellular space | heparin binding | integral to membrane | membrane | plasma membrane | protein binding
Human Homolog	NCAM1[neural cell adhesion molecule 1] | NCAM1[neural cell adhesion molecule 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGGTACCA CCAAATGCCA CTAAAAGCAA TTCAAGAATG (3) 8.1 0.0081 Cb medulloblastoma ATGGGTACCA CACACGCGCA (2) 6.9 0.0069 P8 GC+1d culture ATGGGTACCA GCGAGACAAA TCCCAGGGTC 6.8 0.0068 P8 GC+SHH+1d culture ATGGGTACCA CTGGTCTTTA TCCCAGGGTC TTCAAGAATG (3) 4.8 0.0048 3T3 fibroblasts ATGGGTACCA CCAAATGCCA 10.5 0.0105 E15 cortex TCCCAGGGTC 4.9 0.0049 P1 cortex ATGGGTACCA CACACGCGCA (2) CTGGTCTTTA GCGAGACAAA 40.8 0.0408 Hypothalamus CACACGCGCA (2) 3.6 0.0036 E12.5 retina GGAGGTTCCA 1.9 0.0019 E14.5 retina CTAAAAGCAA CTGGTCTTTA TCCCAGGGTC 5.4 0.0054 E16.5 retina ATGGGTACCA GCGAGACAAA TCCCAGGGTC 10.8 0.0108 E18.5 retina ATGGGTACCA CTGGTCTTTA 7.3 0.0073 P0.5 retina ATGGGTACCA CTAAAAGCAA CTGGTCTTTA GCGAGACAAA TCCCAGGGTC 15.8 0.0158 P2.5 retina CACACGCGCA (2) CTAAAAGCAA CTGGTCTTTA 5.4 0.0054 P4.5 retina CTGGTCTTTA GCGAGACAAA GGAGGTTCCA GGTTTTCCTT (2) TCCCAGGGTC 12 0.012 P6.5 retina ATGGGTACCA CTGGTCTTTA 6.7 0.0067 P10.5 crx- retina CACACGCGCA (2) CTGGTCTTTA TCCCAGGGTC 11.2 0.0112 P10.5 crx+ retina ATGGGTACCA CTGGTCTTTA 3.8 0.0038 Adult retinal ATGGGTACCA CACACGCGCA (2) CCAAATGCCA TCCCAGGGTC 16.8 0.0168 ONL ATGGGTACCA CACACGCGCA (2) CTAAAAGCAA CTGGTCTTTA GGTTTTCCTT (2) 11.4 0.0114