Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.502	Ifnar1	interferon (alpha and beta) receptor 1	16	16 63.2 cM	15975
Gene Ontology	extracellular space | hematopoietin/interferon-class (D200-domain) cytokine receptor activity | integral to membrane | membrane | phosphoribosylamine-glycine ligase activity | receptor activity
Human Homolog	IFNAR1[interferon (alpha, beta and omega) receptor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGCTTCCC (3) 42.4 0.0424 P8 Cb GC CCTTTAATTC (36) 1.6 0.0016 Cb medulloblastoma TGTGCTTCCC (3) 39.3 0.0393 Cb medulloblastoma CCTTTAATTC (36) 4.6 0.0046 Cb medulloblastoma GTAAGCAAAG (6) 2.3 0.0023 P8 GC+1d culture TGTGCTTCCC (3) 33.1 0.0331 P8 GC+1d culture TGATGGCTCA (3) 1.1 0.0011 P8 GC+SHH+1d culture TGTGCTTCCC (3) 29.3 0.0293 P8 GC+SHH+1d culture CCTTTAATTC (36) 7 0.007 P8 GC+SHH+1d culture GTAAGCAAAG (6) 1.2 0.0012 3T3 fibroblasts TGTGCTTCCC (3) 14 0.014 3T3 fibroblasts CCTTTAATTC (36) 7 0.007 E15 cortex TGTGCTTCCC (3) 19.8 0.0198 E15 cortex TGGGCACTGG (9) 4.9 0.0049 P1 cortex CCTTTAATTC (36) 13.6 0.0136 Hypothalamus TGTGCTTCCC (3) 25.4 0.0254 Hypothalamus TGGGCACTGG (9) 1.8 0.0018 E12.5 retina TGTGCTTCCC (3) 41.3 0.0413 E12.5 retina CCTTTAATTC (36) 3.8 0.0038 E12.5 retina TGGGCACTGG (9) 1.9 0.0019 E14.5 retina TGTGCTTCCC (3) 36.4 0.0364 E14.5 retina CCTTTAATTC (36) 7.3 0.0073 E14.5 retina TGGGCACTGG (9) 1.8 0.0018 E16.5 retina TGTGCTTCCC (3) 38 0.038 E16.5 retina CCTTTAATTC (36) 3.6 0.0036 E16.5 retina TGATGGCTCA (3) 3.6 0.0036 E16.5 retina GTGGTCACAA (7) 1.8 0.0018 E18.5 retina TGTGCTTCCC (3) 69.1 0.0691 E18.5 retina CCTTTAATTC (36) 1.8 0.0018 P0.5 retina TGTGCTTCCC (3) 47.1 0.0471 P0.5 retina CCTTTAATTC (36) 5.9 0.0059 P0.5 retina GTAAGCAAAG (6) 2 0.002 P0.5 retina GTGGTCACAA (7) 2 0.002 P2.5 retina TGTGCTTCCC (3) 47.5 0.0475 P2.5 retina CCTTTAATTC (36) 1.8 0.0018 P4.5 retina TGTGCTTCCC (3) 63.4 0.0634 P4.5 retina CCTTTAATTC (36) 4 0.004 P4.5 retina GTAAGCAAAG (6) 2 0.002 P6.5 retina TGTGCTTCCC (3) 38.3 0.0383 P6.5 retina CCTTTAATTC (36) 5 0.005 P10.5 crx- retina TGTGCTTCCC (3) 52 0.052 P10.5 crx- retina TGGGCACTGG (9) 3.7 0.0037 P10.5 crx- retina CCTTTAATTC (36) 1.9 0.0019 P10.5 crx- retina GTGGTCACAA (7) 1.9 0.0019 P10.5 crx- retina TGATGGCTCA (3) 1.9 0.0019 P10.5 crx+ retina TGTGCTTCCC (3) 55.8 0.0558 Adult retinal TGTGCTTCCC (3) 31.5 0.0315 Adult retinal CCTTTAATTC (36) 1.9 0.0019 Adult retinal GTGGTCACAA (7) 1.9 0.0019 ONL TGTGCTTCCC (3) 15.3 0.0153 ONL CCTTTAATTC (36) 3.8 0.0038