Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.502	Ifnar1	interferon (alpha and beta) receptor 1	16	16 63.2 cM	15975
Gene Ontology	extracellular space | hematopoietin/interferon-class (D200-domain) cytokine receptor activity | integral to membrane | membrane | phosphoribosylamine-glycine ligase activity | receptor activity
Human Homolog	IFNAR1[interferon (alpha, beta and omega) receptor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATTC (3) TGTGCTTCCC (2) 44 0.044 Cb medulloblastoma CCTTTAATTC (3) GTAAGCAAAG TGTGCTTCCC (2) 46.2 0.0462 P8 GC+1d culture TGATGGCTCA (2) TGTGCTTCCC (2) 34.2 0.0342 P8 GC+SHH+1d culture CCTTTAATTC (3) GTAAGCAAAG TGTGCTTCCC (2) 37.5 0.0375 3T3 fibroblasts CCTTTAATTC (3) TGTGCTTCCC (2) 21 0.021 E15 cortex TGGGCACTGG TGTGCTTCCC (2) 24.7 0.0247 P1 cortex CCTTTAATTC (3) 13.6 0.0136 Hypothalamus TGGGCACTGG TGTGCTTCCC (2) 27.2 0.0272 E12.5 retina CCTTTAATTC (3) TGGGCACTGG TGTGCTTCCC (2) 47 0.047 E14.5 retina CCTTTAATTC (3) TGGGCACTGG TGTGCTTCCC (2) 45.5 0.0455 E16.5 retina CCTTTAATTC (3) GTGGTCACAA TGATGGCTCA (2) TGTGCTTCCC (2) 47 0.047 E18.5 retina CCTTTAATTC (3) TGTGCTTCCC (2) 70.9 0.0709 P0.5 retina CCTTTAATTC (3) GTAAGCAAAG GTGGTCACAA TGTGCTTCCC (2) 57 0.057 P2.5 retina CCTTTAATTC (3) TGTGCTTCCC (2) 49.3 0.0493 P4.5 retina CCTTTAATTC (3) GTAAGCAAAG TGTGCTTCCC (2) 69.4 0.0694 P6.5 retina CCTTTAATTC (3) TGTGCTTCCC (2) 43.3 0.0433 P10.5 crx- retina CCTTTAATTC (3) GTGGTCACAA TGATGGCTCA (2) TGGGCACTGG TGTGCTTCCC (2) 61.4 0.0614 P10.5 crx+ retina TGTGCTTCCC (2) 55.8 0.0558 Adult retinal CCTTTAATTC (3) GTGGTCACAA TGTGCTTCCC (2) 35.3 0.0353 ONL CCTTTAATTC (3) TGTGCTTCCC (2) 19.1 0.0191