Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5068	Sh3d4	SH3 domain protein 4	14	14 34.5 cM	20410
Gene Ontology	cell adhesion | cytoskeleton | protein binding
Human Homolog	SCAM-1[vinexin beta (SH3-containing adaptor molecule-1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACCTTACTT CAGCAATGTG (3) TACCCTGCCG 4.8 0.0048 Cb medulloblastoma GCAGTTTGGA (2) TGGGCAAAAA (2) 4.6 0.0046 P8 GC+1d culture CACCTTACTT CAGCAATGTG (3) TACCCTGCCG 4.5 0.0045 P8 GC+SHH+1d culture CAGCAATGTG (3) GCAGTTTGGA (2) TGGGCAAAAA (2) 3.6 0.0036 E15 cortex TACCCTGCCG 4.9 0.0049 P1 cortex GCAGTTTGGA (2) 4.5 0.0045 Hypothalamus CAGCAATGTG (3) 1.8 0.0018 E12.5 retina CAGCAATGTG (3) 1.9 0.0019 E16.5 retina GCAGTTTGGA (2) TACCCTGCCG 5.4 0.0054 P0.5 retina CACCTTACTT 3.9 0.0039 P2.5 retina CACCTTACTT GCAGTTTGGA (2) 7.1 0.0071 P4.5 retina CACCTTACTT GCAGTTTGGA (2) TGGGCAAAAA (2) 6 0.006 P6.5 retina CACCTTACTT GCAGTTTGGA (2) TACCCTGCCG 8.4 0.0084 P10.5 crx+ retina TACCCTGCCG TGGGCAAAAA (2) 3.8 0.0038 Adult retinal GCAGTTTGGA (2) TGGGCAAAAA (2) 3.8 0.0038 ONL GCAGTTTGGA (2) 1.9 0.0019