Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5305	D4Mgi39	DNA Segment, Chr 4, Mouse Genome Informatics 39	4		100258
Mm.5305	Gnb2-rs1	guanine nucleotide binding protein, beta 2, related sequence 1	11	7 31.2 cM	14694
Gene Ontology	GTPase activity | heterotrimeric G-protein complex | intracellular signaling cascade | kinase activity | protein kinase C activation | protein kinase C binding | protein localization | receptor activity | signal transduction
Human Homolog	GNB2L1[guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 314 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCTGCTGAT (2) 109.3 0.1093 P8 Cb GC CTGCTGGTGG (15) 13.1 0.0131 P8 Cb GC GTGGCGCACG (61) 13.1 0.0131 P8 Cb GC GCTGCAGTTG (5) 9.8 0.0098 P8 Cb GC CCCTGTGCTT (4) 4.9 0.0049 P8 Cb GC GGGGCCCCCT (7) 3.3 0.0033 P8 Cb GC TCTGCTGTGG (3) 3.3 0.0033 P8 Cb GC CCAAAGAGGT (2) 1.6 0.0016 P8 Cb GC GGCCTTGCTG (11) 1.6 0.0016 P8 Cb GC GGTCCTGCTG (2) 1.6 0.0016 P8 Cb GC GTCTGCCGAT (2) 1.6 0.0016 P8 Cb GC GTGGAAGCTG (11) 1.6 0.0016 P8 Cb GC GTTTTGTTTT (8) 1.6 0.0016 P8 Cb GC GTTTTTTTTT (16) 1.6 0.0016 P8 Cb GC TCCATATTTA (3) 1.6 0.0016 P8 Cb GC TGATGTTGTT (3) 1.6 0.0016 P8 Cb GC TGGAAACTGA (5) 1.6 0.0016 P8 Cb GC TGGAACCTGA (4) 1.6 0.0016 P8 Cb GC TGGAAGCTGA (3) 1.6 0.0016 P8 Cb GC TTATGCTGAT (3) 1.6 0.0016 P8 Cb GC TTCTGTTGAT (3) 1.6 0.0016 P8 Cb GC TTGAAGCTGA (6) 1.6 0.0016 Cb medulloblastoma GTCTGCTGAT (2) 30.1 0.0301 Cb medulloblastoma CTGCTGGTGG (15) 11.6 0.0116 Cb medulloblastoma GGGGCCCCCT (7) 9.2 0.0092 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma GTGGCGCACG (61) 6.9 0.0069 Cb medulloblastoma GTTTTTTTTT (16) 4.6 0.0046 Cb medulloblastoma ACAAGTACAG (5) 2.3 0.0023 Cb medulloblastoma GCTGCAGTTG (5) 2.3 0.0023 Cb medulloblastoma TCTGCTGTGG (3) 2.3 0.0023 Cb medulloblastoma TGTTCTGCTG (4) 2.3 0.0023 P8 GC+1d culture GTCTGCTGAT (2) 93.6 0.0936 P8 GC+1d culture GCTGCAGTTG (5) 17.1 0.0171 P8 GC+1d culture CTGCTGGTGG (15) 16 0.016 P8 GC+1d culture GTGGCGCACG (61) 6.8 0.0068 P8 GC+1d culture GGTCACACTG (5) 5.7 0.0057 P8 GC+1d culture CCTGCTGCTC (14) 4.6 0.0046 P8 GC+1d culture GGGGCCCCCT (7) 4.6 0.0046 P8 GC+1d culture CAGAGCCACC (9) 2.3 0.0023 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture TGATGTTGTT (3) 2.3 0.0023 P8 GC+1d culture TGGAAGCTGA (3) 2.3 0.0023 P8 GC+1d culture TTCTGTTGAT (3) 2.3 0.0023 P8 GC+1d culture CCAAAGAGGT (2) 1.1 0.0011 P8 GC+1d culture GAGGCCAGCA (4) 1.1 0.0011 P8 GC+1d culture GCCATCTGAG (8) 1.1 0.0011 P8 GC+1d culture GGTCCTGCTG (2) 1.1 0.0011 P8 GC+1d culture GTTTTTTTTT (16) 1.1 0.0011 P8 GC+1d culture TCCATATTTA (3) 1.1 0.0011 P8 GC+1d culture TGGAACCTGA (4) 1.1 0.0011 P8 GC+SHH+1d culture GTCTGCTGAT (2) 91.3 0.0913 P8 GC+SHH+1d culture GCTGCAGTTG (5) 21.1 0.0211 P8 GC+SHH+1d culture CTGCTGGTGG (15) 10.5 0.0105 P8 GC+SHH+1d culture CAGAGCCACC (9) 7 0.007 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture CCTGCTGCTC (14) 3.5 0.0035 P8 GC+SHH+1d culture GGGGCCCCCT (7) 3.5 0.0035 P8 GC+SHH+1d culture TGATGTTGTT (3) 3.5 0.0035 P8 GC+SHH+1d culture ATCCTGTCTG (9) 2.3 0.0023 P8 GC+SHH+1d culture CCAAAGAGGT (2) 2.3 0.0023 P8 GC+SHH+1d culture GTGGCGCACG (61) 2.3 0.0023 P8 GC+SHH+1d culture GTTTTGTTTT (8) 2.3 0.0023 P8 GC+SHH+1d culture TCTGCTGTGG (3) 2.3 0.0023 P8 GC+SHH+1d culture TGGAACCTGA (4) 2.3 0.0023 P8 GC+SHH+1d culture CCAAAGATGT (4) 1.2 0.0012 P8 GC+SHH+1d culture GCCACCCAGT (7) 1.2 0.0012 P8 GC+SHH+1d culture GGTCCTGCTG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTCTGCCGAT (2) 1.2 0.0012 P8 GC+SHH+1d culture GTTTTTTTTT (16) 1.2 0.0012 P8 GC+SHH+1d culture TCCATATTTA (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGAAGCTGA (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGAAGCTGG (4) 1.2 0.0012 P8 GC+SHH+1d culture TTGAAGCTGA (6) 1.2 0.0012 3T3 fibroblasts GTCTGCTGAT (2) 129.7 0.1297 3T3 fibroblasts GCTGCAGTTG (5) 66.6 0.0666 3T3 fibroblasts GTGGCGCACG (61) 63.1 0.0631 3T3 fibroblasts CTGCTGGTGG (15) 59.6 0.0596 3T3 fibroblasts TGGAACCTGA (4) 7 0.007 3T3 fibroblasts CCAAAGAGGT (2) 3.5 0.0035 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 3T3 fibroblasts GGTCACACTG (5) 3.5 0.0035 3T3 fibroblasts GTCCGCTGAT (2) 3.5 0.0035 3T3 fibroblasts TGGAAGCTGA (3) 3.5 0.0035 E15 cortex GTGGCGCACG (61) 113.8 0.1138 E15 cortex GTCTGCTGAT (2) 108.9 0.1089 E15 cortex GCTGCAGTTG (5) 14.8 0.0148 E15 cortex CTGCTGGTGG (15) 9.9 0.0099 E15 cortex AGCAGTCCTC (3) 4.9 0.0049 E15 cortex GAAGGGCAAG (4) 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex TCTGCTGTGG (3) 4.9 0.0049 E15 cortex TGGAAGCTGA (3) 4.9 0.0049 E15 cortex TGGAAGCTGG (4) 4.9 0.0049 E15 cortex TGTTCTGCTG (4) 4.9 0.0049 P1 cortex GTCTGCTGAT (2) 18.2 0.0182 P1 cortex GTGGCGCACG (61) 18.2 0.0182 P1 cortex AGCAGTCCTC (3) 4.5 0.0045 P1 cortex CAGAGCCACC (9) 4.5 0.0045 P1 cortex CTGCTGGTGG (15) 4.5 0.0045 P1 cortex GCTGCAGTTG (5) 4.5 0.0045 P1 cortex TCTGCTGATG (9) 4.5 0.0045 P1 cortex TGGAACCTGA (4) 4.5 0.0045 P1 cortex TTGAAGCTGA (6) 4.5 0.0045 Hypothalamus GTCTGCTGAT (2) 25.4 0.0254 Hypothalamus CTGCTGGTGG (15) 7.2 0.0072 Hypothalamus GGGGCCCCCT (7) 5.4 0.0054 Hypothalamus CCCTGTGCTT (4) 3.6 0.0036 Hypothalamus CGGACTGTGC (2) 3.6 0.0036 Hypothalamus GTGGCGCACG (61) 3.6 0.0036 Hypothalamus TGGAAGCTGG (4) 3.6 0.0036 Hypothalamus AACACTTCAA (9) 1.8 0.0018 Hypothalamus GCTGCAGTTG (5) 1.8 0.0018 Hypothalamus GGCTGCTGAT (2) 1.8 0.0018 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 Hypothalamus GGTCACACTG (5) 1.8 0.0018 Hypothalamus TGATGTTGTT (3) 1.8 0.0018 Hypothalamus TTGAAGCTGA (6) 1.8 0.0018 E12.5 retina GTCTGCTGAT (2) 148.3 0.1483 E12.5 retina GCTGCAGTTG (5) 69.5 0.0695 E12.5 retina TGATGTTGTT (3) 15 0.015 E12.5 retina GTGGCGCACG (61) 11.3 0.0113 E12.5 retina CCTGCTGCTC (14) 5.6 0.0056 E12.5 retina TGGAACCTGA (4) 5.6 0.0056 E12.5 retina GTTTTGTTTT (8) 3.8 0.0038 E12.5 retina ATCCTGTCTG (9) 1.9 0.0019 E12.5 retina CCAAAGAGGT (2) 1.9 0.0019 E12.5 retina GGGGCCCCCT (7) 1.9 0.0019 E12.5 retina GTCCGCTGAT (2) 1.9 0.0019 E12.5 retina GTCTGATGAT (3) 1.9 0.0019 E12.5 retina GTGGAAGCTG (11) 1.9 0.0019 E12.5 retina TCTGCTGATG (9) 1.9 0.0019 E12.5 retina TCTGCTGTGG (3) 1.9 0.0019 E12.5 retina TTATGCTGAT (3) 1.9 0.0019 E14.5 retina GTCTGCTGAT (2) 114.8 0.1148 E14.5 retina GTGGCGCACG (61) 29.2 0.0292 E14.5 retina CCAAAGAGGT (2) 9.1 0.0091 E14.5 retina TTGAAGCTGA (6) 5.5 0.0055 E14.5 retina TGGAAGCTGA (3) 3.6 0.0036 E14.5 retina CGGACTGTGC (2) 1.8 0.0018 E14.5 retina CTGCTGGTGG (15) 1.8 0.0018 E14.5 retina GCAGGGGGGG (5) 1.8 0.0018 E14.5 retina GCTGCAGTTG (5) 1.8 0.0018 E14.5 retina GGGGCCCCCT (7) 1.8 0.0018 E14.5 retina GTTTTTTTTT (16) 1.8 0.0018 E14.5 retina TGGAACCTGA (4) 1.8 0.0018 E14.5 retina TGGAAGCTGG (4) 1.8 0.0018 E14.5 retina TTCTGTTGAT (3) 1.8 0.0018 E14.5 retina TTTTGCTTAT (5) 1.8 0.0018 E16.5 retina GTCTGCTGAT (2) 164.8 0.1648 E16.5 retina GTGGCGCACG (61) 25.4 0.0254 E16.5 retina CCAAAGAGGT (2) 10.9 0.0109 E16.5 retina CCTGCTGCTC (14) 5.4 0.0054 E16.5 retina GCCACCCAGT (7) 3.6 0.0036 E16.5 retina GCTGCAGTTG (5) 3.6 0.0036 E16.5 retina GTGGAAGCTG (11) 3.6 0.0036 E16.5 retina TGGAAGCTGA (3) 3.6 0.0036 E16.5 retina TTCTGTTGAT (3) 3.6 0.0036 E16.5 retina AACACTTCAA (9) 1.8 0.0018 E16.5 retina GCCATCTGAG (8) 1.8 0.0018 E16.5 retina GGCTGCTGAT (2) 1.8 0.0018 E16.5 retina TGGAAGCTGG (4) 1.8 0.0018 E16.5 retina TTGAAGCTGA (6) 1.8 0.0018 E18.5 retina GTCTGCTGAT (2) 81.9 0.0819 E18.5 retina GCTGCAGTTG (5) 27.3 0.0273 E18.5 retina GTGGCGCACG (61) 10.9 0.0109 E18.5 retina CTGCTGGTGG (15) 3.6 0.0036 E18.5 retina GCCATCTGAG (8) 3.6 0.0036 E18.5 retina GGGGCCCCCT (7) 3.6 0.0036 E18.5 retina TGATGTTGTT (3) 3.6 0.0036 E18.5 retina CCAAAGAGGT (2) 1.8 0.0018 E18.5 retina CCAAAGATGT (4) 1.8 0.0018 E18.5 retina CCTGCTGCTC (14) 1.8 0.0018 E18.5 retina GTTTTTTTTT (16) 1.8 0.0018 E18.5 retina TTCTGTTGAT (3) 1.8 0.0018 P0.5 retina GTCTGCTGAT (2) 111.9 0.1119 P0.5 retina GTGGCGCACG (61) 25.5 0.0255 P0.5 retina GCTGCAGTTG (5) 17.7 0.0177 P0.5 retina CTGCTGGTGG (15) 9.8 0.0098 P0.5 retina CCAAAGAGGT (2) 7.9 0.0079 P0.5 retina TGATGTTGTT (3) 7.9 0.0079 P0.5 retina TGGAACCTGA (4) 5.9 0.0059 P0.5 retina GGGGCCCCCT (7) 3.9 0.0039 P0.5 retina TGGAAGCTGA (3) 3.9 0.0039 P0.5 retina AGCAGTCCTC (3) 2 0.002 P0.5 retina CCCTGTGCTT (4) 2 0.002 P0.5 retina CGGATCTTGG (2) 2 0.002 P0.5 retina GAAGGGCAAG (4) 2 0.002 P0.5 retina GGTCACACTG (5) 2 0.002 P0.5 retina GTCCGCTGAT (2) 2 0.002 P0.5 retina GTCTGATGAT (3) 2 0.002 P0.5 retina GTCTGCCGAT (2) 2 0.002 P0.5 retina GTTTTTTTTT (16) 2 0.002 P0.5 retina TGGAAGCTGG (4) 2 0.002 P0.5 retina TTGAAGCTGA (6) 2 0.002 P2.5 retina GTCTGCTGAT (2) 72.2 0.0722 P2.5 retina GTGGCGCACG (61) 17.6 0.0176 P2.5 retina GCTGCAGTTG (5) 12.3 0.0123 P2.5 retina CCCTGTGCTT (4) 7 0.007 P2.5 retina GCTGGTGGTT (7) 7 0.007 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina TGGAACCTGA (4) 7 0.007 P2.5 retina CTGCTGGTGG (15) 5.3 0.0053 P2.5 retina GCAGGGGGGG (5) 5.3 0.0053 P2.5 retina GGGGCCCCCT (7) 5.3 0.0053 P2.5 retina TCTGCTGTGG (3) 3.5 0.0035 P2.5 retina TGATGTTGTT (3) 3.5 0.0035 P2.5 retina AACACTTCAA (9) 1.8 0.0018 P2.5 retina CCAAAGAGGT (2) 1.8 0.0018 P2.5 retina GTGGAAGCTG (11) 1.8 0.0018 P2.5 retina TTGAAGCTGA (6) 1.8 0.0018 P4.5 retina GTCTGCTGAT (2) 43.6 0.0436 P4.5 retina GTGGCGCACG (61) 17.8 0.0178 P4.5 retina GCTGCAGTTG (5) 11.9 0.0119 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina TGATGTTGTT (3) 5.9 0.0059 P4.5 retina CCTGCTGCTC (14) 4 0.004 P4.5 retina AACACTTCAA (9) 2 0.002 P4.5 retina CAGAGCCACC (9) 2 0.002 P4.5 retina CCAAAGAGGT (2) 2 0.002 P4.5 retina CTGCTGGTGG (15) 2 0.002 P4.5 retina GCCATCTGAG (8) 2 0.002 P4.5 retina GCTGGTGGTT (7) 2 0.002 P4.5 retina GGTCACACTG (5) 2 0.002 P4.5 retina GTCTGATGAT (3) 2 0.002 P4.5 retina GTTTTTTTTT (16) 2 0.002 P4.5 retina TCTGCTGATG (9) 2 0.002 P4.5 retina TCTGCTGTGG (3) 2 0.002 P4.5 retina TGGAAGCTGG (4) 2 0.002 P4.5 retina TTCTGTTGAT (3) 2 0.002 P6.5 retina GTCTGCTGAT (2) 75 0.075 P6.5 retina GTGGCGCACG (61) 38.3 0.0383 P6.5 retina GCTGCAGTTG (5) 16.7 0.0167 P6.5 retina CTGCTGGTGG (15) 6.7 0.0067 P6.5 retina GAGGCCAGCA (4) 5 0.005 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina GTTTTGTTTT (8) 3.3 0.0033 P6.5 retina TGGAAGCTGG (4) 3.3 0.0033 P6.5 retina TTATGCTGAT (3) 3.3 0.0033 P6.5 retina AACACTTCAA (9) 1.7 0.0017 P6.5 retina CCTGCTGCTC (14) 1.7 0.0017 P6.5 retina CGGACTGTGC (2) 1.7 0.0017 P6.5 retina GCCACCCAGT (7) 1.7 0.0017 P6.5 retina GCCATCTGAG (8) 1.7 0.0017 P6.5 retina GGCCTTGCTG (11) 1.7 0.0017 P6.5 retina GGTCACACTG (5) 1.7 0.0017 P6.5 retina GTGGAAGCTG (11) 1.7 0.0017 P6.5 retina TCTGCTGTGG (3) 1.7 0.0017 P6.5 retina TTCTGTTGAT (3) 1.7 0.0017 P6.5 retina TTTTGCTTAT (5) 1.7 0.0017 P10.5 crx- retina GTCTGCTGAT (2) 102.2 0.1022 P10.5 crx- retina GTGGCGCACG (61) 13 0.013 P10.5 crx- retina CTGCTGGTGG (15) 11.1 0.0111 P10.5 crx- retina GGGGCCCCCT (7) 9.3 0.0093 P10.5 crx- retina TGGAAGCTGA (3) 7.4 0.0074 P10.5 crx- retina ACAAGTACAG (5) 3.7 0.0037 P10.5 crx- retina ATCCTGTCTG (9) 3.7 0.0037 P10.5 crx- retina CGGATCTTGG (2) 3.7 0.0037 P10.5 crx- retina TGGAAGCTGG (4) 3.7 0.0037 P10.5 crx- retina AACACTTCAA (9) 1.9 0.0019 P10.5 crx- retina CCAAAGAGGT (2) 1.9 0.0019 P10.5 crx- retina CCTGCTGCTC (14) 1.9 0.0019 P10.5 crx- retina GTGGAAGCTG (11) 1.9 0.0019 P10.5 crx- retina GTTTTTTTTT (16) 1.9 0.0019 P10.5 crx- retina TGATGTTGTT (3) 1.9 0.0019 P10.5 crx- retina TTCTGTTGAT (3) 1.9 0.0019 P10.5 crx- retina TTGAAGCTGA (6) 1.9 0.0019 P10.5 crx+ retina GTCTGCTGAT (2) 86.5 0.0865 P10.5 crx+ retina GTGGCGCACG (61) 32.7 0.0327 P10.5 crx+ retina GCTGCAGTTG (5) 11.5 0.0115 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina CCTGCTGCTC (14) 5.8 0.0058 P10.5 crx+ retina AGCAGTCCTC (3) 3.8 0.0038 P10.5 crx+ retina ATCCTGTCTG (9) 3.8 0.0038 P10.5 crx+ retina CAGAGCCACC (9) 3.8 0.0038 P10.5 crx+ retina CTGCTGGTGG (15) 3.8 0.0038 P10.5 crx+ retina GGGGCCCCCT (7) 3.8 0.0038 P10.5 crx+ retina TCTGCTGTGG (3) 3.8 0.0038 P10.5 crx+ retina TGGAACCTGA (4) 3.8 0.0038 P10.5 crx+ retina GAGGCCAGCA (4) 1.9 0.0019 P10.5 crx+ retina GCTGGTGGTT (7) 1.9 0.0019 P10.5 crx+ retina GGTCCTGCTG (2) 1.9 0.0019 P10.5 crx+ retina GTTTTTTTTT (16) 1.9 0.0019 P10.5 crx+ retina TGGAAGCTGG (4) 1.9 0.0019 P10.5 crx+ retina TTATGCTGAT (3) 1.9 0.0019 P10.5 crx+ retina TTTTGCTTAT (5) 1.9 0.0019 Adult retinal GTCTGCTGAT (2) 44.4 0.0444 Adult retinal GTGGCGCACG (61) 22.2 0.0222 Adult retinal CTGCTGGTGG (15) 20.4 0.0204 Adult retinal CCTGCTGCTC (14) 3.7 0.0037 Adult retinal GCTGCAGTTG (5) 3.7 0.0037 Adult retinal GGGGCCCCCT (7) 3.7 0.0037 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal AGCAGTCCTC (3) 1.9 0.0019 Adult retinal CGGATCTTGG (2) 1.9 0.0019 Adult retinal GAAGGGCAAG (4) 1.9 0.0019 Adult retinal GCCATCTGAG (8) 1.9 0.0019 Adult retinal GCTGGTGGTT (7) 1.9 0.0019 Adult retinal GGCCTTGCTG (11) 1.9 0.0019 Adult retinal GGCTGCTGAT (2) 1.9 0.0019 Adult retinal GTCTGATGAT (3) 1.9 0.0019 Adult retinal GTTTTGTTTT (8) 1.9 0.0019 Adult retinal TGTTCTGCTG (4) 1.9 0.0019 Adult retinal TTCTGTTGAT (3) 1.9 0.0019 ONL GTGGCGCACG (61) 23 0.023 ONL GTCTGCTGAT (2) 15.3 0.0153 ONL CTGCTGGTGG (15) 7.7 0.0077 ONL GTTTTGTTTT (8) 5.7 0.0057 ONL TGGAAACTGA (5) 5.7 0.0057 ONL TTCTGTTGAT (3) 3.8 0.0038 ONL GCCATCTGAG (8) 1.9 0.0019 ONL GCTGCAGTTG (5) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019 ONL TGGAACCTGA (4) 1.9 0.0019