Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.61526 Hmgcs13-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 13  13 66.0 cM  208715 
 Gene Ontology acetyl-CoA metabolism | C21-steroid hormone biosynthesis | cholesterol biosynthesis | cytoplasm | DNA binding | hydroxymethylglutaryl-CoA synthase activity | lyase activity | nucleus | regulation of transcription, DNA-dependent | sex differentiation | transcription factor activity | transcription factor complex
 Human Homolog HMGCS1[3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCTAATTTTTTT (2)9.80.0098
P8 Cb GCTGAAATTTTC4.90.0049
P8 Cb GCCAGTTTAGTT3.30.0033
P8 Cb GCTTAGCAAGTT1.60.0016
Cb medulloblastomaGGGGAAAAAA (4)4.60.0046
Cb medulloblastomaTAATTTTTTT (2)4.60.0046
Cb medulloblastomaCAGTTTAGTT2.30.0023
Cb medulloblastomaTGAAATTTTC2.30.0023
Cb medulloblastomaTTAGCAAGTT2.30.0023
P8 GC+1d cultureTAATTTTTTT (2)320.032
P8 GC+1d cultureCAGTTTAGTT4.60.0046
P8 GC+1d cultureTGAAATTTTC4.60.0046
P8 GC+1d cultureAGCCTCAGAC1.10.0011
P8 GC+1d cultureCACCATCTCC1.10.0011
P8 GC+1d cultureGGGGAAAAAA (4)1.10.0011
P8 GC+1d cultureTTAGCAAGTT1.10.0011
P8 GC+SHH+1d cultureTAATTTTTTT (2)22.20.0222
P8 GC+SHH+1d cultureCAGTTTAGTT4.70.0047
P8 GC+SHH+1d cultureTGAAATTTTC4.70.0047
P8 GC+SHH+1d cultureCACCATCTCC3.50.0035
P8 GC+SHH+1d cultureAGCTGAATAA2.30.0023
P8 GC+SHH+1d cultureAGCCTCAGAC1.20.0012
P8 GC+SHH+1d cultureGTCTGATTAG1.20.0012
P8 GC+SHH+1d cultureTTAGCAAGTT1.20.0012
E15 cortexGGGGAAAAAA (4)4.90.0049
P1 cortexTAATTTTTTT (2)27.30.0273
P1 cortexGTCTGATTAG4.50.0045
HypothalamusTAATTTTTTT (2)12.70.0127
HypothalamusCAGTTTAGTT3.60.0036
HypothalamusAGCCTCAGAC1.80.0018
HypothalamusTGAAATTTTC1.80.0018
E12.5 retinaCAGTTTAGTT150.015
E12.5 retinaTAATTTTTTT (2)9.40.0094
E12.5 retinaTGAAATTTTC3.80.0038
E12.5 retinaGGGGAAAAAA (4)1.90.0019
E12.5 retinaGTCTGATTAG1.90.0019
E14.5 retinaTAATTTTTTT (2)16.40.0164
E14.5 retinaAGCCTCAGAC1.80.0018
E14.5 retinaAGCTGAATAA1.80.0018
E14.5 retinaCACCATCTCC1.80.0018
E14.5 retinaCAGTTTAGTT1.80.0018
E14.5 retinaTGAAATTTTC1.80.0018
E16.5 retinaTAATTTTTTT (2)9.10.0091
E16.5 retinaAGCCTCAGAC5.40.0054
E16.5 retinaGTCTGATTAG5.40.0054
E16.5 retinaCAGTTTAGTT1.80.0018
E16.5 retinaGGGGAAAAAA (4)1.80.0018
E16.5 retinaTGAAATTTTC1.80.0018
E18.5 retinaTAATTTTTTT (2)23.60.0236
E18.5 retinaGGGGAAAAAA (4)3.60.0036
E18.5 retinaGTCTGATTAG3.60.0036
E18.5 retinaAGCCTCAGAC1.80.0018
E18.5 retinaCACCATCTCC1.80.0018
E18.5 retinaCAGTTTAGTT1.80.0018
E18.5 retinaTTAGCAAGTT1.80.0018
P0.5 retinaTAATTTTTTT (2)13.70.0137
P2.5 retinaTAATTTTTTT (2)19.40.0194
P2.5 retinaTTAGCAAGTT3.50.0035
P2.5 retinaAGCTGAATAA1.80.0018
P2.5 retinaCAGTTTAGTT1.80.0018
P4.5 retinaTAATTTTTTT (2)13.90.0139
P4.5 retinaCAGTTTAGTT20.002
P6.5 retinaTTAGCAAGTT50.005
P6.5 retinaGGGGAAAAAA (4)1.70.0017
P6.5 retinaTAATTTTTTT (2)1.70.0017
P10.5 crx- retinaTAATTTTTTT (2)9.30.0093
P10.5 crx+ retinaTAATTTTTTT (2)5.80.0058
P10.5 crx+ retinaTGAAATTTTC3.80.0038
P10.5 crx+ retinaGTCTGATTAG1.90.0019
Adult retinalTAATTTTTTT (2)1.90.0019
Adult retinalTGAAATTTTC1.90.0019
Adult retinalTTAGCAAGTT1.90.0019
ONLTAATTTTTTT (2)3.80.0038