Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6343	Npm1	nucleophosmin 1	11		18148
Gene Ontology	nucleic acid binding | nucleolus | nucleus | protein binding | RNA binding
Human Homolog	NPM1[nucleophosmin (nucleolar phosphoprotein B23, numatrin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAAATACA TCTGGAAAGC (3) TGAAATAAAC TTTTAACCTT (3) 71.7 0.0717 Cb medulloblastoma CAAGGGCAAA (5) TGAAATAAAC 37 0.037 P8 GC+1d culture CAAGGGCAAA (5) TAAATAAACT (2) TCTGGAAAGC (3) TGAAATAAAC TTTTAACCTT (3) 41.1 0.0411 P8 GC+SHH+1d culture CAAGGGCAAA (5) TAAATAAACT (2) TATATTTGTC TGAAATAAAC TTTTAACCTT (3) 86.6 0.0866 3T3 fibroblasts TCTGGAAAGC (3) TGAAATAAAC TTTTAACCTT (3) 21 0.021 E15 cortex CAAGGGCAAA (5) TCTGGAAAGC (3) TGAAATAAAC 29.6 0.0296 P1 cortex TGAAATAAAC TGAAATAAAT (2) 40.9 0.0409 Hypothalamus TATATTTGTC TGAAATAAAC TGAAATAAAT (2) TTTTAACCTT (3) 41.6 0.0416 E12.5 retina TATATTTGTC TCTGGAAAGC (3) TGAAATAAAC TTTTAACCTT (3) 116.5 0.1165 E14.5 retina CAAGGGCAAA (5) GGAAAATACA TATATTTGTC TGAAATAAAC TTTTAACCTT (3) 83.8 0.0838 E16.5 retina CAAGGGCAAA (5) TATATTTGTC TCTGGAAAGC (3) TGAAATAAAC TTTTAACCTT (3) 72.5 0.0725 E18.5 retina GGAAAATACA TATATTTGTC TGAAATAAAC TTTTAACCTT (3) 141.9 0.1419 P0.5 retina CAAGGGCAAA (5) TCTGGAAAGC (3) TGAAATAAAC TTTTAACCTT (3) 43.3 0.0433 P2.5 retina CAAGGGCAAA (5) GGAAAATACA TATATTTGTC TGAAATAAAC TGAAATAAAT (2) TTTTAACCTT (3) 70.5 0.0705 P4.5 retina CAAGGGCAAA (5) TATATTTGTC TGAAATAAAC TTTTAACCTT (3) 61.5 0.0615 P6.5 retina CAAGGGCAAA (5) GGAAAATACA TGAAATAAAC TTTTAACCTT (3) 28.4 0.0284 P10.5 crx- retina CAAGGGCAAA (5) TATATTTGTC TGAAATAAAC TTTTAACCTT (3) 16.8 0.0168 P10.5 crx+ retina GGAAAATACA TGAAATAAAC TTTTAACCTT (3) 11.5 0.0115 Adult retinal TCTGGAAAGC (3) TGAAATAAAC 7.5 0.0075 ONL CAAGGGCAAA (5) TGAAATAAAC TGAAATAAAT (2) 17.2 0.0172