Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.6478
Phr1
pam, highwire, rpm 1
14
14 54.58 cM
105689
Mm.6478
1700087I21Rik
RIKEN cDNA 1700087I21 gene
14
76619
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCAATAAAGC
(
3
)
6.5
0.0065
P8 Cb GC
ATGCTGGTAG
(
2
)
1.6
0.0016
Cb medulloblastoma
TCAATAAAGC
(
3
)
11.6
0.0116
Cb medulloblastoma
TGGACAACTC
(
2
)
2.3
0.0023
P8 GC+1d culture
TCAATAAAGC
(
3
)
14.8
0.0148
P8 GC+1d culture
TACATTCCAA
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TCAATAAAGC
(
3
)
11.7
0.0117
P8 GC+SHH+1d culture
GACTGAGAAG
(
2
)
2.3
0.0023
E15 cortex
TCAATAAAGC
(
3
)
9.9
0.0099
P1 cortex
TCAATAAAGC
(
3
)
45.5
0.0455
P1 cortex
CATCACACAA
(
2
)
4.5
0.0045
P1 cortex
TACATTCCAA
(
4
)
4.5
0.0045
Hypothalamus
TCAATAAAGC
(
3
)
29
0.029
Hypothalamus
TCTTGGTTTT
(
2
)
1.8
0.0018
E12.5 retina
TCAATAAAGC
(
3
)
7.5
0.0075
E14.5 retina
TCAATAAAGC
(
3
)
12.8
0.0128
E14.5 retina
ATGCTGGTAG
(
2
)
1.8
0.0018
E14.5 retina
CATCACACAA
(
2
)
1.8
0.0018
E16.5 retina
TCAATAAAGC
(
3
)
19.9
0.0199
E16.5 retina
TGGACAACTC
(
2
)
1.8
0.0018
E18.5 retina
TCAATAAAGC
(
3
)
18.2
0.0182
E18.5 retina
TGGACAACTC
(
2
)
1.8
0.0018
P0.5 retina
TCAATAAAGC
(
3
)
17.7
0.0177
P0.5 retina
CATCACACAA
(
2
)
2
0.002
P2.5 retina
TCAATAAAGC
(
3
)
26.4
0.0264
P2.5 retina
GACTGAGAAG
(
2
)
1.8
0.0018
P2.5 retina
TACATTCCAA
(
4
)
1.8
0.0018
P2.5 retina
TCTTGGTTTT
(
2
)
1.8
0.0018
P4.5 retina
TCAATAAAGC
(
3
)
13.9
0.0139
P4.5 retina
CATCACACAA
(
2
)
2
0.002
P4.5 retina
TCTTGGTTTT
(
2
)
2
0.002
P6.5 retina
TCAATAAAGC
(
3
)
21.7
0.0217
P10.5 crx- retina
TCAATAAAGC
(
3
)
18.6
0.0186
P10.5 crx- retina
TCTTGGTTTT
(
2
)
3.7
0.0037
P10.5 crx- retina
CATCACACAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TCAATAAAGC
(
3
)
25
0.025
P10.5 crx+ retina
TCTTGGTTTT
(
2
)
5.8
0.0058
Adult retinal
TCAATAAAGC
(
3
)
13
0.013
Adult retinal
ATGCTGGTAG
(
2
)
1.9
0.0019
Adult retinal
CATCACACAA
(
2
)
1.9
0.0019
Adult retinal
TACATTCCAA
(
4
)
1.9
0.0019
ONL
TCAATAAAGC
(
3
)
5.7
0.0057