| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTAAAAAAAA (2)
| 55.5 | 0.0555 |
| Cb medulloblastoma | CTGACCATCA (2) GTAAAAAAAA (2)
| 131.8 | 0.1318 |
| P8 GC+1d culture | GTAAAAAAAA (2)
| 74.2 | 0.0742 |
| P8 GC+SHH+1d culture | GTAAAAAAAA (2)
| 132.3 | 0.1323 |
| 3T3 fibroblasts | GTAAAAAAAA (2)
| 7 | 0.007 |
| E15 cortex | GTAAAAAAAA (2)
| 34.6 | 0.0346 |
| P1 cortex | GTAAAAAAAA (2)
| 36.4 | 0.0364 |
| Hypothalamus | AGTCTAGGGA GTAAAAAAAA (2)
| 101.4 | 0.1014 |
| E12.5 retina | ATGAAACCTT GTAAAAAAAA (2)
| 43.2 | 0.0432 |
| E14.5 retina | AGTCTAGGGA ATGAAACCTT CTGACCATCA (2) GTAAAAAAAA (2)
| 89.2 | 0.0892 |
| E16.5 retina | CTGACCATCA (2) GTAAAAAAAA (2)
| 70.6 | 0.0706 |
| E18.5 retina | ATGAAACCTT GGAAGGACTG (2) GGAAGGAGTG (4) GTAAAAAAAA (2)
| 194.6 | 0.1946 |
| P0.5 retina | GTAAAAAAAA (2)
| 51 | 0.051 |
| P2.5 retina | GTAAAAAAAA (2)
| 103.8 | 0.1038 |
| P4.5 retina | ATGAAACCTT GGAAGGAGTG (4) GTAAAAAAAA (2)
| 146.7 | 0.1467 |
| P6.5 retina | GTAAAAAAAA (2)
| 66.7 | 0.0667 |
| P10.5 crx- retina | GGAAGGAGTG (4) GTAAAAAAAA (2)
| 27.9 | 0.0279 |
| P10.5 crx+ retina | GTAAAAAAAA (2)
| 55.8 | 0.0558 |
| Adult retinal | AGTCTAGGGA GGAAGGACTG (2) GTAAAAAAAA (2)
| 26 | 0.026 |
| ONL | GGAAGGACTG (2) GGAAGGAGTG (4) GTAAAAAAAA (2)
| 28.7 | 0.0287 |