Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.726	Bsg	basigin	10	10 42.4 cM	12215
Gene Ontology	extracellular space | integral to membrane | mannose binding | membrane | sugar binding
Human Homolog	BSG[basigin (OK blood group)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGACAAGG CACTGGCCTT CTCTGACTTA CTTTGACTTA GCAGCCCTCC GCAGCCCTCT (2) 78.2 0.0782 Cb medulloblastoma AATGACAAGG CACTGGCCTT CTCTGACTTA GCAGCCCTCT (2) 43.9 0.0439 P8 GC+1d culture AATGACAAGG CACTGGCCTT CTCTGACTTA GCAGGCCTCT 62.7 0.0627 P8 GC+SHH+1d culture AAACCCCCCA AATGAACAAG AATGACAAGG CACTGGCCTT CTCTGACTTA GCAGCCCTCC 62.1 0.0621 3T3 fibroblasts AATGACAAGG CACTGGCCTT CTCTGACTTA GCAGCCCTCC 94.6 0.0946 E15 cortex CTCTGACTTA GCAGGCCTCT 14.8 0.0148 P1 cortex CACTGGCCTT CTCTGACTTA 72.7 0.0727 Hypothalamus AATGACAAGG CACTGGCCTT CAGCCAGTTC (3) CTCTGACTTA 34.3 0.0343 E12.5 retina AATGACAAGG CACTGGCCTT CTCTGACTTA 50.7 0.0507 E14.5 retina AATGACAAGG CAGACGTGAA CTCTGACTTA GCAGCCCTCT (2) 16.3 0.0163 E16.5 retina AATGACAAGG CACTGGCCTT CAGCCAGTTC (3) CTCTGACTTA GCAGCCCTCT (2) GCAGGCCTCT 27.1 0.0271 E18.5 retina AATGACAAGG CACTGGCCTT CTCTGACTTA CTTTGACTTA 23.6 0.0236 P0.5 retina CACTGGCCTT CTCTGACTTA 19.6 0.0196 P2.5 retina AAACCCCCCA AATGACAAGG CACTGGCCTT CAGACGTGAA CTCTGACTTA CTTTGACTTA GCAGGCCTCT 51.3 0.0513 P4.5 retina AATGACAAGG CTCTGACTTA 31.7 0.0317 P6.5 retina CACTGGCCTT CTCTGACTTA 43.3 0.0433 P10.5 crx- retina AAACCCCCCA AATGACAAGG CACTGGCCTT CAGCCAGTTC (3) CTCTGACTTA 72.6 0.0726 P10.5 crx+ retina AATGACAAGG CACTGGCCTT CAGCCAGTTC (3) CTCTGACTTA GCAGCCCTCT (2) 78.8 0.0788 Adult retinal AAACCCCCCA AATGACAAGG CACTGGCCTT CAGACGTGAA CTCTGACTTA GCAGCCCTCC GCAGCCCTCT (2) GCAGGCCTCT 76.1 0.0761 ONL AATGACAAGG CACTGGCCTT CTCTGACTTA GCAGGCCTCT 38.3 0.0383