Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.784	Nbr1	neighbor of Brca1 gene 1	11	11 60.5 cM	17966
Gene Ontology	zinc ion binding
Human Homolog	M17S2[membrane component, chromosome 17, surface marker 2 (ovarian carcinoma antigen CA125)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAAACTTA (9) 6.5 0.0065 P8 Cb GC TTTGAGGAAA (2) 3.3 0.0033 P8 Cb GC TTTTTGTAAA (7) 3.3 0.0033 P8 Cb GC ACCACATTAA (2) 1.6 0.0016 Cb medulloblastoma AATAAACTTA (9) 16.2 0.0162 Cb medulloblastoma TTTGAGAAAA 13.9 0.0139 Cb medulloblastoma ACCACATTAA (2) 2.3 0.0023 P8 GC+1d culture TTTGAGAAAA 6.8 0.0068 P8 GC+1d culture TTTTTGTAAA (7) 5.7 0.0057 P8 GC+1d culture AATAAACTTA (9) 3.4 0.0034 P8 GC+1d culture ACCACATTAA (2) 2.3 0.0023 P8 GC+1d culture AATAAAATCT (3) 1.1 0.0011 P8 GC+1d culture TGGATGTTTT (4) 1.1 0.0011 P8 GC+1d culture TTTGAGGAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture AATAAACTTA (9) 3.5 0.0035 P8 GC+SHH+1d culture TTTGAGAAAA 2.3 0.0023 P8 GC+SHH+1d culture AATAAAATCT (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGATGTTTT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTGAGGAAA (2) 1.2 0.0012 3T3 fibroblasts CTCTGGGTTT (3) 7 0.007 3T3 fibroblasts AATAAACTTA (9) 3.5 0.0035 E15 cortex TGTAATCTCA (2) 4.9 0.0049 P1 cortex TTTGAGAAAA 4.5 0.0045 P1 cortex TTTTTGTAAA (7) 4.5 0.0045 Hypothalamus AATAAACTTA (9) 14.5 0.0145 Hypothalamus TTTTTGTAAA (7) 1.8 0.0018 E12.5 retina AATAAACTTA (9) 16.9 0.0169 E12.5 retina TTTTTGTAAA (7) 11.3 0.0113 E12.5 retina TGGATGTTTT (4) 1.9 0.0019 E12.5 retina TTTGAGAAAA 1.9 0.0019 E12.5 retina TTTGAGGAAA (2) 1.9 0.0019 E14.5 retina TTTTTGTAAA (7) 7.3 0.0073 E14.5 retina AATAAACTTA (9) 5.5 0.0055 E14.5 retina CTCTGGGTTT (3) 1.8 0.0018 E14.5 retina TTTGAGAAAA 1.8 0.0018 E14.5 retina TTTGAGGAAA (2) 1.8 0.0018 E16.5 retina AATAAACTTA (9) 7.2 0.0072 E16.5 retina AATAAAATCT (3) 1.8 0.0018 E16.5 retina TGGATGTTTT (4) 1.8 0.0018 E16.5 retina TTTGAGAAAA 1.8 0.0018 E16.5 retina TTTGAGGAAA (2) 1.8 0.0018 E16.5 retina TTTTTGTAAA (7) 1.8 0.0018 E18.5 retina AATAAACTTA (9) 7.3 0.0073 E18.5 retina TTTTTGTAAA (7) 3.6 0.0036 E18.5 retina TGGATGTTTT (4) 1.8 0.0018 E18.5 retina TTTGAGAAAA 1.8 0.0018 P0.5 retina AATGAGATCT (3) 5.9 0.0059 P0.5 retina AATAAACTTA (9) 2 0.002 P0.5 retina ACCACATTAA (2) 2 0.002 P0.5 retina TTTTTGTAAA (7) 2 0.002 P2.5 retina AATAAACTTA (9) 12.3 0.0123 P2.5 retina TTTTTGTAAA (7) 7 0.007 P2.5 retina TTTGAGAAAA 5.3 0.0053 P2.5 retina TGGATGTTTT (4) 1.8 0.0018 P4.5 retina AATAAACTTA (9) 23.8 0.0238 P4.5 retina TTTGAGAAAA 9.9 0.0099 P4.5 retina TTTTTGTAAA (7) 9.9 0.0099 P4.5 retina ACCACATTAA (2) 2 0.002 P6.5 retina AATAAACTTA (9) 15 0.015 P6.5 retina TTTGAGAAAA 5 0.005 P6.5 retina TGTAATCTCA (2) 1.7 0.0017 P10.5 crx- retina TTTTTGTAAA (7) 9.3 0.0093 P10.5 crx- retina TTTGAGAAAA 5.6 0.0056 P10.5 crx- retina AATAAACTTA (9) 3.7 0.0037 P10.5 crx- retina TTTGAGGAAA (2) 1.9 0.0019 P10.5 crx+ retina AATAAACTTA (9) 13.5 0.0135 P10.5 crx+ retina TTTGAGAAAA 9.6 0.0096 P10.5 crx+ retina TTTGAGGAAA (2) 3.8 0.0038 P10.5 crx+ retina TTTTTGTAAA (7) 3.8 0.0038 P10.5 crx+ retina TGTAATCTCA (2) 1.9 0.0019 Adult retinal TTTGAGAAAA 7.4 0.0074 Adult retinal AATAAACTTA (9) 3.7 0.0037 Adult retinal CTCTGGGTTT (3) 3.7 0.0037 ONL AATAAACTTA (9) 3.8 0.0038 ONL TTTGAGGAAA (2) 3.8 0.0038 ONL TTTTTGTAAA (7) 3.8 0.0038