Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.784	Nbr1	neighbor of Brca1 gene 1	11	11 60.5 cM	17966
Gene Ontology	zinc ion binding
Human Homolog	M17S2[membrane component, chromosome 17, surface marker 2 (ovarian carcinoma antigen CA125)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAAACTTA (6) ACCACATTAA TTTGAGGAAA (2) TTTTTGTAAA (2) 14.7 0.0147 Cb medulloblastoma AATAAACTTA (6) ACCACATTAA TTTGAGAAAA 32.4 0.0324 P8 GC+1d culture AATAAAATCT (3) AATAAACTTA (6) ACCACATTAA TGGATGTTTT (2) TTTGAGAAAA TTTGAGGAAA (2) TTTTTGTAAA (2) 21.5 0.0215 P8 GC+SHH+1d culture AATAAAATCT (3) AATAAACTTA (6) TGGATGTTTT (2) TTTGAGAAAA TTTGAGGAAA (2) 9.4 0.0094 3T3 fibroblasts AATAAACTTA (6) CTCTGGGTTT 10.5 0.0105 E15 cortex TGTAATCTCA 4.9 0.0049 P1 cortex TTTGAGAAAA TTTTTGTAAA (2) 9 0.009 Hypothalamus AATAAACTTA (6) TTTTTGTAAA (2) 16.3 0.0163 E12.5 retina AATAAACTTA (6) TGGATGTTTT (2) TTTGAGAAAA TTTGAGGAAA (2) TTTTTGTAAA (2) 33.9 0.0339 E14.5 retina AATAAACTTA (6) CTCTGGGTTT TTTGAGAAAA TTTGAGGAAA (2) TTTTTGTAAA (2) 18.2 0.0182 E16.5 retina AATAAAATCT (3) AATAAACTTA (6) TGGATGTTTT (2) TTTGAGAAAA TTTGAGGAAA (2) TTTTTGTAAA (2) 16.2 0.0162 E18.5 retina AATAAACTTA (6) TGGATGTTTT (2) TTTGAGAAAA TTTTTGTAAA (2) 14.5 0.0145 P0.5 retina AATAAACTTA (6) AATGAGATCT (2) ACCACATTAA TTTTTGTAAA (2) 11.9 0.0119 P2.5 retina AATAAACTTA (6) TGGATGTTTT (2) TTTGAGAAAA TTTTTGTAAA (2) 26.4 0.0264 P4.5 retina AATAAACTTA (6) ACCACATTAA TTTGAGAAAA TTTTTGTAAA (2) 45.6 0.0456 P6.5 retina AATAAACTTA (6) TGTAATCTCA TTTGAGAAAA 21.7 0.0217 P10.5 crx- retina AATAAACTTA (6) TTTGAGAAAA TTTGAGGAAA (2) TTTTTGTAAA (2) 20.5 0.0205 P10.5 crx+ retina AATAAACTTA (6) TGTAATCTCA TTTGAGAAAA TTTGAGGAAA (2) TTTTTGTAAA (2) 32.6 0.0326 Adult retinal AATAAACTTA (6) CTCTGGGTTT TTTGAGAAAA 14.8 0.0148 ONL AATAAACTTA (6) TTTGAGGAAA (2) TTTTTGTAAA (2) 11.4 0.0114