Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.788	Ly6e	lymphocyte antigen 6 complex, locus E	15	15 41.7 cM	17069
Gene Ontology	defense response | extracellular space | membrane | plasma membrane
Human Homolog	LY6E[lymphocyte antigen 6 complex, locus E]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACCACCACA (14) 55.5 0.0555 P8 Cb GC GAGGACTGCC 16.3 0.0163 P8 Cb GC AATATGATCT (2) 3.3 0.0033 P8 Cb GC CCTTTAATTC (36) 1.6 0.0016 P8 Cb GC GGCAGCCTCC (2) 1.6 0.0016 Cb medulloblastoma CACCACCACA (14) 9.2 0.0092 Cb medulloblastoma GAGGACTGCC 6.9 0.0069 Cb medulloblastoma AATATGATCT (2) 4.6 0.0046 Cb medulloblastoma AGAGTTCTTC (4) 4.6 0.0046 Cb medulloblastoma CCTTTAATTC (36) 4.6 0.0046 Cb medulloblastoma CTTATTTCCC (2) 2.3 0.0023 Cb medulloblastoma GGCAGCCTCC (2) 2.3 0.0023 P8 GC+1d culture GAGGACTGCC 92.5 0.0925 P8 GC+1d culture CACCACCACA (14) 50.2 0.0502 P8 GC+1d culture CTCATTTATC 3.4 0.0034 P8 GC+1d culture AGCACACAGA (6) 2.3 0.0023 P8 GC+1d culture CACCACCAAA (2) 2.3 0.0023 P8 GC+1d culture CTTATTTCCC (2) 1.1 0.0011 P8 GC+1d culture GGCAGCCTCC (2) 1.1 0.0011 P8 GC+1d culture TGTTCTCCAT 1.1 0.0011 P8 GC+SHH+1d culture GAGGACTGCC 62.1 0.0621 P8 GC+SHH+1d culture CACCACCACA (14) 30.4 0.0304 P8 GC+SHH+1d culture CCTTTAATTC (36) 7 0.007 P8 GC+SHH+1d culture AGAGTTCTTC (4) 3.5 0.0035 P8 GC+SHH+1d culture CACCACCAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTATTTCCC (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCAGCCTCC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTTCTCCAT 1.2 0.0012 3T3 fibroblasts CACCACCACA (14) 287.4 0.2874 3T3 fibroblasts CCTTTAATTC (36) 7 0.007 3T3 fibroblasts GAGGACTGCC 3.5 0.0035 E15 cortex CACCACCACA (14) 34.6 0.0346 E15 cortex GAGGACTGCC 4.9 0.0049 P1 cortex CACCACCACA (14) 27.3 0.0273 P1 cortex CCTTTAATTC (36) 13.6 0.0136 P1 cortex AGAGTTCTTC (4) 4.5 0.0045 P1 cortex CACCACCAAA (2) 4.5 0.0045 Hypothalamus CACCACCACA (14) 18.1 0.0181 Hypothalamus GAGGACTGCC 10.9 0.0109 Hypothalamus AATATGATCT (2) 9.1 0.0091 Hypothalamus AGCACACAGA (6) 1.8 0.0018 Hypothalamus CACCACCAAA (2) 1.8 0.0018 Hypothalamus CTCATTTATC 1.8 0.0018 E12.5 retina CACCACCACA (14) 41.3 0.0413 E12.5 retina AGAGTTCTTC (4) 9.4 0.0094 E12.5 retina GAGGACTGCC 7.5 0.0075 E12.5 retina CCTTTAATTC (36) 3.8 0.0038 E12.5 retina AGCACACAGA (6) 1.9 0.0019 E12.5 retina TGTTCTCCAT 1.9 0.0019 E14.5 retina CACCACCACA (14) 9.1 0.0091 E14.5 retina CCTTTAATTC (36) 7.3 0.0073 E14.5 retina GAGGACTGCC 3.6 0.0036 E14.5 retina AGAGTTCTTC (4) 1.8 0.0018 E14.5 retina GGCAGCCTCC (2) 1.8 0.0018 E16.5 retina CACCACCACA (14) 18.1 0.0181 E16.5 retina CCTTTAATTC (36) 3.6 0.0036 E16.5 retina GAGGACTGCC 3.6 0.0036 E16.5 retina AGAGTTCTTC (4) 1.8 0.0018 E16.5 retina CTCATTTATC 1.8 0.0018 E18.5 retina CACCACCACA (14) 23.6 0.0236 E18.5 retina CACCACCAAA (2) 3.6 0.0036 E18.5 retina CCTTTAATTC (36) 1.8 0.0018 E18.5 retina CTCATTTATC 1.8 0.0018 E18.5 retina GAGGACTGCC 1.8 0.0018 P0.5 retina CACCACCACA (14) 41.2 0.0412 P0.5 retina CCTTTAATTC (36) 5.9 0.0059 P0.5 retina CTCATTTATC 3.9 0.0039 P0.5 retina GAGGACTGCC 3.9 0.0039 P0.5 retina AGAGTTCTTC (4) 2 0.002 P0.5 retina CACCACCAAA (2) 2 0.002 P2.5 retina CACCACCACA (14) 24.6 0.0246 P2.5 retina AGAGTTCTTC (4) 3.5 0.0035 P2.5 retina GAGGACTGCC 3.5 0.0035 P2.5 retina CACCACCAAA (2) 1.8 0.0018 P2.5 retina CCTTTAATTC (36) 1.8 0.0018 P2.5 retina CTCATTTATC 1.8 0.0018 P4.5 retina CACCACCACA (14) 25.8 0.0258 P4.5 retina CCTTTAATTC (36) 4 0.004 P4.5 retina AGAGTTCTTC (4) 2 0.002 P4.5 retina CTCATTTATC 2 0.002 P4.5 retina GAGGACTGCC 2 0.002 P6.5 retina CACCACCACA (14) 28.3 0.0283 P6.5 retina GAGGACTGCC 6.7 0.0067 P6.5 retina CCTTTAATTC (36) 5 0.005 P6.5 retina CTCATTTATC 5 0.005 P6.5 retina AGAGTTCTTC (4) 3.3 0.0033 P6.5 retina CACCACCAAA (2) 1.7 0.0017 P10.5 crx- retina CACCACCACA (14) 13 0.013 P10.5 crx- retina AGAGTTCTTC (4) 1.9 0.0019 P10.5 crx- retina CCTTTAATTC (36) 1.9 0.0019 P10.5 crx- retina CTCATTTATC 1.9 0.0019 P10.5 crx- retina TGTTCTCCAT 1.9 0.0019 P10.5 crx+ retina CACCACCACA (14) 17.3 0.0173 P10.5 crx+ retina AGAGTTCTTC (4) 1.9 0.0019 P10.5 crx+ retina AGCACACAGA (6) 1.9 0.0019 P10.5 crx+ retina CACCACCAAA (2) 1.9 0.0019 P10.5 crx+ retina CTTATTTCCC (2) 1.9 0.0019 Adult retinal CACCACCACA (14) 13 0.013 Adult retinal GGCAGCCTCC (2) 3.7 0.0037 Adult retinal CCTTTAATTC (36) 1.9 0.0019 Adult retinal CTCATTTATC 1.9 0.0019 ONL CACCACCACA (14) 23 0.023 ONL CCTTTAATTC (36) 3.8 0.0038 ONL AGAGTTCTTC (4) 1.9 0.0019 ONL CTCATTTATC 1.9 0.0019