Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.788	Ly6e	lymphocyte antigen 6 complex, locus E	15	15 41.7 cM	17069
Gene Ontology	defense response | extracellular space | membrane | plasma membrane
Human Homolog	LY6E[lymphocyte antigen 6 complex, locus E]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATATGATCT CACCACCACA CCTTTAATTC (3) GAGGACTGCC GGCAGCCTCC (2) 78.3 0.0783 Cb medulloblastoma AATATGATCT AGAGTTCTTC CACCACCACA CCTTTAATTC (3) CTTATTTCCC GAGGACTGCC GGCAGCCTCC (2) 34.5 0.0345 P8 GC+1d culture AGCACACAGA (2) CACCACCAAA (2) CACCACCACA CTCATTTATC CTTATTTCCC GAGGACTGCC GGCAGCCTCC (2) TGTTCTCCAT 154 0.154 P8 GC+SHH+1d culture AGAGTTCTTC CACCACCAAA (2) CACCACCACA CCTTTAATTC (3) CTTATTTCCC GAGGACTGCC GGCAGCCTCC (2) TGTTCTCCAT 107.8 0.1078 3T3 fibroblasts CACCACCACA CCTTTAATTC (3) GAGGACTGCC 297.9 0.2979 E15 cortex CACCACCACA GAGGACTGCC 39.5 0.0395 P1 cortex AGAGTTCTTC CACCACCAAA (2) CACCACCACA CCTTTAATTC (3) 49.9 0.0499 Hypothalamus AATATGATCT AGCACACAGA (2) CACCACCAAA (2) CACCACCACA CTCATTTATC GAGGACTGCC 43.5 0.0435 E12.5 retina AGAGTTCTTC AGCACACAGA (2) CACCACCACA CCTTTAATTC (3) GAGGACTGCC TGTTCTCCAT 65.8 0.0658 E14.5 retina AGAGTTCTTC CACCACCACA CCTTTAATTC (3) GAGGACTGCC GGCAGCCTCC (2) 23.6 0.0236 E16.5 retina AGAGTTCTTC CACCACCACA CCTTTAATTC (3) CTCATTTATC GAGGACTGCC 28.9 0.0289 E18.5 retina CACCACCAAA (2) CACCACCACA CCTTTAATTC (3) CTCATTTATC GAGGACTGCC 32.6 0.0326 P0.5 retina AGAGTTCTTC CACCACCAAA (2) CACCACCACA CCTTTAATTC (3) CTCATTTATC GAGGACTGCC 58.9 0.0589 P2.5 retina AGAGTTCTTC CACCACCAAA (2) CACCACCACA CCTTTAATTC (3) CTCATTTATC GAGGACTGCC 37 0.037 P4.5 retina AGAGTTCTTC CACCACCACA CCTTTAATTC (3) CTCATTTATC GAGGACTGCC 35.8 0.0358 P6.5 retina AGAGTTCTTC CACCACCAAA (2) CACCACCACA CCTTTAATTC (3) CTCATTTATC GAGGACTGCC 50 0.05 P10.5 crx- retina AGAGTTCTTC CACCACCACA CCTTTAATTC (3) CTCATTTATC TGTTCTCCAT 20.6 0.0206 P10.5 crx+ retina AGAGTTCTTC AGCACACAGA (2) CACCACCAAA (2) CACCACCACA CTTATTTCCC 24.9 0.0249 Adult retinal CACCACCACA CCTTTAATTC (3) CTCATTTATC GGCAGCCTCC (2) 20.5 0.0205 ONL AGAGTTCTTC CACCACCACA CCTTTAATTC (3) CTCATTTATC 30.6 0.0306