Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8029	Sema6b	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	17		20359
Gene Ontology	development | extracellular space | integral to membrane | membrane | neurogenesis | receptor activity
Human Homolog	SEMA6B[sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTGTTTGT (4) 6.5 0.0065 P8 Cb GC TCTGCAGCTG (8) 3.3 0.0033 Cb medulloblastoma GCCTGTTTGT (4) 16.2 0.0162 Cb medulloblastoma TCTGCAGCTG (8) 9.2 0.0092 Cb medulloblastoma CCACGTGGCC 6.9 0.0069 P8 GC+1d culture GCCTGTTTGT (4) 6.8 0.0068 P8 GC+1d culture TCTGCAGCTG (8) 3.4 0.0034 P8 GC+1d culture CCACGTGGCC 1.1 0.0011 P8 GC+SHH+1d culture GCCTGTTTGT (4) 7 0.007 P8 GC+SHH+1d culture TCTGCAGCTG (8) 3.5 0.0035 P8 GC+SHH+1d culture CCACGTGGCC 2.3 0.0023 3T3 fibroblasts TCTGCAGCTG (8) 10.5 0.0105 3T3 fibroblasts GCCTGTTTGT (4) 3.5 0.0035 E15 cortex CCACGTGGCC 9.9 0.0099 E15 cortex GCCTGTTTGT (4) 4.9 0.0049 P1 cortex CCACGTGGCC 9.1 0.0091 P1 cortex GCCTGTTTGT (4) 9.1 0.0091 P1 cortex TCTGCAGCTG (8) 4.5 0.0045 Hypothalamus GCCTGTTTGT (4) 3.6 0.0036 Hypothalamus GTCTGTTTGT (7) 3.6 0.0036 Hypothalamus TCTGCAGCTG (8) 3.6 0.0036 E12.5 retina GCCTGTTTGT (4) 13.1 0.0131 E12.5 retina TCTGCAGCTG (8) 7.5 0.0075 E14.5 retina GCCTGTTTGT (4) 21.9 0.0219 E16.5 retina GCCTGTTTGT (4) 18.1 0.0181 E16.5 retina TCTGCAGCTG (8) 5.4 0.0054 E16.5 retina CCACGTGGCC 1.8 0.0018 E16.5 retina GTCTGTTTGT (7) 1.8 0.0018 E18.5 retina GCCTGTTTGT (4) 10.9 0.0109 E18.5 retina TCTGCAGCTG (8) 7.3 0.0073 P0.5 retina GCCTGTTTGT (4) 9.8 0.0098 P0.5 retina TCTGCAGCTG (8) 3.9 0.0039 P0.5 retina CCACGTGGCC 2 0.002 P2.5 retina GCCTGTTTGT (4) 19.4 0.0194 P2.5 retina TCTGCAGCTG (8) 3.5 0.0035 P4.5 retina GCCTGTTTGT (4) 25.8 0.0258 P4.5 retina TCTGCAGCTG (8) 4 0.004 P6.5 retina GCCTGTTTGT (4) 8.3 0.0083 P6.5 retina TCTGCAGCTG (8) 1.7 0.0017 P10.5 crx- retina TCTGCAGCTG (8) 11.1 0.0111 P10.5 crx- retina CCACGTGGCC 1.9 0.0019 P10.5 crx- retina GCCTGTTTGT (4) 1.9 0.0019 P10.5 crx+ retina GCCTGTTTGT (4) 5.8 0.0058 P10.5 crx+ retina TCTGCAGCTG (8) 5.8 0.0058 P10.5 crx+ retina CCACGTGGCC 3.8 0.0038 Adult retinal GCCTGTTTGT (4) 13 0.013 Adult retinal TCTGCAGCTG (8) 5.6 0.0056 Adult retinal GTCTGTTTGT (7) 1.9 0.0019 ONL GCCTGTTTGT (4) 15.3 0.0153 ONL TCTGCAGCTG (8) 1.9 0.0019