Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8029	Sema6b	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	17		20359
Gene Ontology	development | extracellular space | integral to membrane | membrane | neurogenesis | receptor activity
Human Homolog	SEMA6B[sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTGTTTGT TCTGCAGCTG (3) 9.8 0.0098 Cb medulloblastoma CCACGTGGCC GCCTGTTTGT TCTGCAGCTG (3) 32.3 0.0323 P8 GC+1d culture CCACGTGGCC GCCTGTTTGT TCTGCAGCTG (3) 11.3 0.0113 P8 GC+SHH+1d culture CCACGTGGCC GCCTGTTTGT TCTGCAGCTG (3) 12.8 0.0128 3T3 fibroblasts GCCTGTTTGT TCTGCAGCTG (3) 14 0.014 E15 cortex CCACGTGGCC GCCTGTTTGT 14.8 0.0148 P1 cortex CCACGTGGCC GCCTGTTTGT TCTGCAGCTG (3) 22.7 0.0227 Hypothalamus GCCTGTTTGT GTCTGTTTGT (3) TCTGCAGCTG (3) 10.8 0.0108 E12.5 retina GCCTGTTTGT TCTGCAGCTG (3) 20.6 0.0206 E14.5 retina GCCTGTTTGT 21.9 0.0219 E16.5 retina CCACGTGGCC GCCTGTTTGT GTCTGTTTGT (3) TCTGCAGCTG (3) 27.1 0.0271 E18.5 retina GCCTGTTTGT TCTGCAGCTG (3) 18.2 0.0182 P0.5 retina CCACGTGGCC GCCTGTTTGT TCTGCAGCTG (3) 15.7 0.0157 P2.5 retina GCCTGTTTGT TCTGCAGCTG (3) 22.9 0.0229 P4.5 retina GCCTGTTTGT TCTGCAGCTG (3) 29.8 0.0298 P6.5 retina GCCTGTTTGT TCTGCAGCTG (3) 10 0.01 P10.5 crx- retina CCACGTGGCC GCCTGTTTGT TCTGCAGCTG (3) 14.9 0.0149 P10.5 crx+ retina CCACGTGGCC GCCTGTTTGT TCTGCAGCTG (3) 15.4 0.0154 Adult retinal GCCTGTTTGT GTCTGTTTGT (3) TCTGCAGCTG (3) 20.5 0.0205 ONL GCCTGTTTGT TCTGCAGCTG (3) 17.2 0.0172