Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.85410	Smarcc1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	9		20588
Gene Ontology	chromatin | chromatin assembly/disassembly | chromatin binding | DNA packaging | intracellular | nucleus | organogenesis | SWI/SNF complex
Human Homolog	SMARCC1[SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGATGAGCAG 3.3 0.0033 P8 Cb GC ACTGTCAGTT 1.6 0.0016 P8 Cb GC GAAGACCCCA 1.6 0.0016 P8 Cb GC TCATTGAACG 1.6 0.0016 P8 GC+1d culture TCATTGAACG 1.1 0.0011 P8 GC+1d culture TGATGAGCAG 1.1 0.0011 P8 GC+SHH+1d culture ATTAAACCTG 3.5 0.0035 P8 GC+SHH+1d culture TGATGAGCAG 3.5 0.0035 P8 GC+SHH+1d culture ACTGTCAGTT 2.3 0.0023 P8 GC+SHH+1d culture GAAGACCCCA 1.2 0.0012 3T3 fibroblasts TGATGAGCAG 21 0.021 E15 cortex ACTGTCAGTT 4.9 0.0049 E15 cortex GAAGACCCCA 4.9 0.0049 E15 cortex TGATGAGCAG 4.9 0.0049 P1 cortex ACTGTCAGTT 13.6 0.0136 P1 cortex ATTAAACCTG 4.5 0.0045 Hypothalamus ATTAAACCTG 1.8 0.0018 E12.5 retina ATTAAACCTG 1.9 0.0019 E12.5 retina TGATGAGCAG 1.9 0.0019 E14.5 retina TGATGAGCAG 5.5 0.0055 E14.5 retina ACTGTCAGTT 1.8 0.0018 E14.5 retina TCATTGAACG 1.8 0.0018 E16.5 retina TGATGAGCAG 3.6 0.0036 E16.5 retina ATTAAACCTG 1.8 0.0018 P0.5 retina ATTAAACCTG 2 0.002 P2.5 retina ATTAAACCTG 1.8 0.0018 P2.5 retina TCATTGAACG 1.8 0.0018 P4.5 retina ACTGTCAGTT 4 0.004 P4.5 retina TCATTGAACG 2 0.002 P6.5 retina TCATTGAACG 1.7 0.0017 P6.5 retina TGATGAGCAG 1.7 0.0017 P10.5 crx+ retina ATTAAACCTG 1.9 0.0019 P10.5 crx+ retina TCATTGAACG 1.9 0.0019 P10.5 crx+ retina TGATGAGCAG 1.9 0.0019 Adult retinal ATTAAACCTG 1.9 0.0019 Adult retinal GAAGACCCCA 1.9 0.0019