| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCACAAGAAC (3) TCTTAAAAAA (3) TTACTTACCA (3)
| 13 | 0.013 |
| P8 GC+1d culture | GCACAAGAAC (3) TTACTTACCA (3)
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | TTACTTACCA (3)
| 9.4 | 0.0094 |
| 3T3 fibroblasts | TTACTTACCA (3)
| 3.5 | 0.0035 |
| Hypothalamus | AAGAGAGTGT (3) TTACTTACCA (3)
| 3.6 | 0.0036 |
| E12.5 retina | TTACTTACCA (3)
| 1.9 | 0.0019 |
| E14.5 retina | TTACTTACCA (3)
| 5.5 | 0.0055 |
| E16.5 retina | AAGAGAGTGT (3) GCACAAGAAC (3) TTACTTACCA (3)
| 10.8 | 0.0108 |
| E18.5 retina | TCTTAAAAAA (3)
| 1.8 | 0.0018 |
| P0.5 retina | TTACTTACCA (3)
| 3.9 | 0.0039 |
| P2.5 retina | GCACAAGAAC (3) TCTTAAAAAA (3) TTACTTACCA (3)
| 17.6 | 0.0176 |
| P4.5 retina | TCTTAAAAAA (3) TTACTTACCA (3)
| 4 | 0.004 |
| P6.5 retina | AAGAGAGTGT (3) TCTTAAAAAA (3) TTACTTACCA (3)
| 10.1 | 0.0101 |
| P10.5 crx- retina | AAGAGAGTGT (3) TTACTTACCA (3)
| 18.6 | 0.0186 |
| P10.5 crx+ retina | GCACAAGAAC (3) TTACTTACCA (3)
| 11.5 | 0.0115 |
| Adult retinal | TCTTAAAAAA (3)
| 1.9 | 0.0019 |
| ONL | TCTTAAAAAA (3)
| 1.9 | 0.0019 |