Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.88216	Snrpb	small nuclear ribonucleoprotein B	2	2 73.0 cM	20638
Mm.88216	D10Mgi26	DNA Segment, Chr 10, Mouse Genome Informatics 26	10		103328
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 127 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGTCTCCCT (3) 13.1 0.0131 P8 Cb GC CGAGGTCTGC (3) 4.9 0.0049 P8 Cb GC AACAGCAAAA (3) 3.3 0.0033 P8 Cb GC CCACGAGGTG (2) 3.3 0.0033 P8 Cb GC GGAAAGTCCT (7) 3.3 0.0033 P8 Cb GC TGGGTTTGGG (7) 3.3 0.0033 P8 Cb GC AACAGTAAAA (4) 1.6 0.0016 P8 Cb GC AACTTGATCC (4) 1.6 0.0016 Cb medulloblastoma CCCATTGGAG (7) 4.6 0.0046 Cb medulloblastoma AACAGCAAAA (3) 2.3 0.0023 Cb medulloblastoma AGTCTCCTGG (6) 2.3 0.0023 Cb medulloblastoma CGAGGTCTGC (3) 2.3 0.0023 Cb medulloblastoma GAGTCTCCCT (3) 2.3 0.0023 P8 GC+1d culture GAGTCTCCCT (3) 17.1 0.0171 P8 GC+1d culture CCACGAGGTG (2) 4.6 0.0046 P8 GC+1d culture ACGGTGGGGA (3) 2.3 0.0023 P8 GC+1d culture AAGTCTCCCT (3) 1.1 0.0011 P8 GC+1d culture CTACTGCTCT (5) 1.1 0.0011 P8 GC+1d culture GAGTCTCCTG (7) 1.1 0.0011 P8 GC+SHH+1d culture GAGTCTCCCT (3) 29.3 0.0293 P8 GC+SHH+1d culture CTGGGCTCCT (9) 3.5 0.0035 P8 GC+SHH+1d culture AACAGCAAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture AACAGTAAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture CCACGAGGTG (2) 1.2 0.0012 P8 GC+SHH+1d culture CCCCCCTCCC (6) 1.2 0.0012 P8 GC+SHH+1d culture CTACTGCTCT (5) 1.2 0.0012 P8 GC+SHH+1d culture GAGTCTCCTG (7) 1.2 0.0012 P8 GC+SHH+1d culture GGGGAGCCGG (3) 1.2 0.0012 3T3 fibroblasts GAGTCTCCCT (3) 17.5 0.0175 3T3 fibroblasts ACGGTGGGGA (3) 7 0.007 3T3 fibroblasts CCACGAGGTG (2) 3.5 0.0035 3T3 fibroblasts CTGGGCTCCT (9) 3.5 0.0035 E15 cortex AAGTCTCCCT (3) 9.9 0.0099 E15 cortex GAGTCTCCCT (3) 9.9 0.0099 E15 cortex GGGGAGCCGG (3) 9.9 0.0099 E15 cortex GAGTCTCCTG (7) 4.9 0.0049 E15 cortex GGAAAGTCCT (7) 4.9 0.0049 P1 cortex GAGTCTCCCT (3) 9.1 0.0091 P1 cortex GGAAAGTCCT (7) 4.5 0.0045 Hypothalamus ACGGTGGGGA (3) 1.8 0.0018 Hypothalamus AGTCTCCTGG (6) 1.8 0.0018 Hypothalamus CCACGAGGTG (2) 1.8 0.0018 Hypothalamus CGAGGTCTGC (3) 1.8 0.0018 Hypothalamus GAGTCTCCCT (3) 1.8 0.0018 Hypothalamus GGGTCCTCTG (8) 1.8 0.0018 E12.5 retina GAGTCTCCCT (3) 45.1 0.0451 E12.5 retina CCACGAGGTG (2) 5.6 0.0056 E12.5 retina GAGTCTCCTG (7) 5.6 0.0056 E12.5 retina AACTGCATAA (3) 1.9 0.0019 E12.5 retina ACGGTGGGGA (3) 1.9 0.0019 E12.5 retina CTGGGCTCCT (9) 1.9 0.0019 E12.5 retina GGAAAGTCCT (7) 1.9 0.0019 E14.5 retina GAGTCTCCCT (3) 40.1 0.0401 E14.5 retina CCACGAGGTG (2) 16.4 0.0164 E14.5 retina AACTGCATAA (3) 3.6 0.0036 E14.5 retina ACGGTGGGGA (3) 3.6 0.0036 E14.5 retina GAGTCTCCTG (7) 3.6 0.0036 E14.5 retina AACAGCAAAA (3) 1.8 0.0018 E14.5 retina AACTTGATCC (4) 1.8 0.0018 E14.5 retina CCCATTGGAG (7) 1.8 0.0018 E16.5 retina GAGTCTCCCT (3) 68.8 0.0688 E16.5 retina CCACGAGGTG (2) 18.1 0.0181 E16.5 retina AACTTGATCC (4) 3.6 0.0036 E16.5 retina CCCCCCTCCC (6) 3.6 0.0036 E16.5 retina AACTGCATAA (3) 1.8 0.0018 E16.5 retina ACGGTGGGGA (3) 1.8 0.0018 E16.5 retina CTGGGCTCCT (9) 1.8 0.0018 E18.5 retina GAGTCTCCCT (3) 29.1 0.0291 E18.5 retina GAGTCTCCTG (7) 9.1 0.0091 E18.5 retina TGGGTTTGGG (7) 3.6 0.0036 E18.5 retina ACGGTGGGGA (3) 1.8 0.0018 E18.5 retina CCACGAGGTG (2) 1.8 0.0018 E18.5 retina CCCCCCTCCC (6) 1.8 0.0018 E18.5 retina CGAGGTCTGC (3) 1.8 0.0018 P0.5 retina GAGTCTCCCT (3) 62.8 0.0628 P0.5 retina GAGTCTCCTG (7) 7.9 0.0079 P0.5 retina CCCACGAGGT (2) 5.9 0.0059 P0.5 retina CTACTGCTCT (5) 5.9 0.0059 P0.5 retina CGAGGTCTGC (3) 3.9 0.0039 P0.5 retina ACGGTGGGGA (3) 2 0.002 P0.5 retina CCACGAGGTG (2) 2 0.002 P0.5 retina CTGGGCTCCT (9) 2 0.002 P0.5 retina GGGTCCTCTG (8) 2 0.002 P0.5 retina TGGGTTTGGG (7) 2 0.002 P2.5 retina GAGTCTCCCT (3) 28.2 0.0282 P2.5 retina GAGTCTCCTG (7) 5.3 0.0053 P2.5 retina ACGGTGGGGA (3) 3.5 0.0035 P2.5 retina AACTGCATAA (3) 1.8 0.0018 P2.5 retina AGTCTCCTGG (6) 1.8 0.0018 P2.5 retina CTGGGCTCCT (9) 1.8 0.0018 P4.5 retina GAGTCTCCCT (3) 27.7 0.0277 P4.5 retina CCACGAGGTG (2) 5.9 0.0059 P4.5 retina GGGTCCTCTG (8) 4 0.004 P4.5 retina AGTCTCCTGG (6) 2 0.002 P4.5 retina GGGGAGCCGG (3) 2 0.002 P6.5 retina GAGTCTCCCT (3) 20 0.02 P6.5 retina GAGTCTCCTG (7) 5 0.005 P6.5 retina GGGTCCTCTG (8) 3.3 0.0033 P6.5 retina AACAGTAAAA (4) 1.7 0.0017 P6.5 retina ACGGTGGGGA (3) 1.7 0.0017 P6.5 retina AGTCTCCTGG (6) 1.7 0.0017 P6.5 retina CCACGAGGTG (2) 1.7 0.0017 P6.5 retina CCCACGAGGT (2) 1.7 0.0017 P10.5 crx- retina GAGTCTCCCT (3) 20.4 0.0204 P10.5 crx- retina CCACGAGGTG (2) 3.7 0.0037 P10.5 crx- retina CTACTGCTCT (5) 1.9 0.0019 P10.5 crx- retina GAGTCTCCTG (7) 1.9 0.0019 P10.5 crx+ retina GAGTCTCCCT (3) 5.8 0.0058 P10.5 crx+ retina ACGGTGGGGA (3) 3.8 0.0038 P10.5 crx+ retina CCACGAGGTG (2) 1.9 0.0019 P10.5 crx+ retina CTACTGCTCT (5) 1.9 0.0019 P10.5 crx+ retina GAGTCTCCTG (7) 1.9 0.0019 P10.5 crx+ retina TGGGTTTGGG (7) 1.9 0.0019 Adult retinal GAGTCTCCCT (3) 22.2 0.0222 Adult retinal AGTCTCCTGG (6) 5.6 0.0056 Adult retinal CTACTGCTCT (5) 5.6 0.0056 Adult retinal GAGTCTCCTG (7) 3.7 0.0037 Adult retinal ACGGTGGGGA (3) 1.9 0.0019 Adult retinal CCACGAGGTG (2) 1.9 0.0019 Adult retinal CCCCCCTCCC (6) 1.9 0.0019 Adult retinal CTGGGCTCCT (9) 1.9 0.0019 Adult retinal GGGTCCTCTG (8) 1.9 0.0019 ONL GAGTCTCCCT (3) 19.2 0.0192 ONL AACAGTAAAA (4) 3.8 0.0038 ONL CCCCCCTCCC (6) 1.9 0.0019 ONL GAGTCTCCTG (7) 1.9 0.0019 ONL TGGGTTTGGG (7) 1.9 0.0019