Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.89579	Mpdu1	mannose-P-dolichol utilization defect 1	11	11 B3 (11 39.0 cM)	24070
Gene Ontology	integral to membrane
Human Homolog	MPDU1[mannose-P-dolichol utilization defect 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 124 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GTAAAAAAAA (28) 55.5 0.0555 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GTTAAAAAAA (26) 4.9 0.0049 P8 Cb GC GTTTTAATTG (3) 4.9 0.0049 P8 Cb GC GTTCTGGTGG (7) 1.6 0.0016 P8 Cb GC TGCCACCACC (8) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GTAAAAAAAA (28) 129.5 0.1295 Cb medulloblastoma GTTAAAAAAA (26) 25.4 0.0254 Cb medulloblastoma GTTTTAATTG (3) 2.3 0.0023 Cb medulloblastoma TGCCACCACC (8) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GTAAAAAAAA (28) 74.2 0.0742 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture GTTAAAAAAA (26) 13.7 0.0137 P8 GC+1d culture GTTTTAATTG (3) 8 0.008 P8 GC+1d culture GTTTTAATGT (4) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GTAAAAAAAA (28) 132.3 0.1323 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture GTTAAAAAAA (26) 16.4 0.0164 P8 GC+SHH+1d culture GTTTTAATTG (3) 11.7 0.0117 P8 GC+SHH+1d culture TGCCACCACC (8) 3.5 0.0035 P8 GC+SHH+1d culture GTTTTAATTC (8) 2.3 0.0023 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GTAAAAAAAA (28) 7 0.007 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GTAAAAAAAA (28) 34.6 0.0346 E15 cortex TGCCACCACC (8) 9.9 0.0099 E15 cortex CTTCCCTGCC (2) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex GTAAAAAAAA (28) 36.4 0.0364 P1 cortex GTTAAAAAAA (26) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GTAAAAAAAA (28) 99.6 0.0996 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus GTTAAAAAAA (26) 9.1 0.0091 Hypothalamus GTTTTAATTG (3) 1.8 0.0018 Hypothalamus TGCCACCACC (8) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GTAAAAAAAA (28) 41.3 0.0413 E12.5 retina GTTAAAAAAA (26) 3.8 0.0038 E12.5 retina CTTCCCTGCC (2) 1.9 0.0019 E12.5 retina GTTCTGGTGG (7) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GTAAAAAAAA (28) 82 0.082 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina GTTAAAAAAA (26) 20 0.02 E14.5 retina GTTTTAATTG (3) 3.6 0.0036 E14.5 retina TGCCACCACC (8) 3.6 0.0036 E16.5 retina GTAAAAAAAA (28) 68.8 0.0688 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GTTAAAAAAA (26) 16.3 0.0163 E16.5 retina GTTTTAATTG (3) 5.4 0.0054 E16.5 retina TTTCGGAGTC (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GTAAAAAAAA (28) 189.2 0.1892 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GTTAAAAAAA (26) 27.3 0.0273 E18.5 retina GTTTTAATTG (3) 16.4 0.0164 E18.5 retina TGCCACCACC (8) 1.8 0.0018 E18.5 retina TTTCGGAGTC (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GTAAAAAAAA (28) 51 0.051 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GTTTTAATTG (3) 5.9 0.0059 P0.5 retina GTTAAAAAAA (26) 3.9 0.0039 P0.5 retina TGCCACCACC (8) 3.9 0.0039 P0.5 retina GTTCTGGTGG (7) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GTAAAAAAAA (28) 103.8 0.1038 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GTTAAAAAAA (26) 7 0.007 P2.5 retina TGCCACCACC (8) 5.3 0.0053 P2.5 retina GTTTTAATTG (3) 3.5 0.0035 P2.5 retina CTTCCCTGCC (2) 1.8 0.0018 P2.5 retina GTTCTGGTGG (7) 1.8 0.0018 P2.5 retina GTTTTAATTC (8) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GTAAAAAAAA (28) 142.7 0.1427 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GTTAAAAAAA (26) 11.9 0.0119 P4.5 retina GTTTTAATTG (3) 9.9 0.0099 P4.5 retina GTTTTAATGT (4) 4 0.004 P4.5 retina TTTCGGAGTC (3) 4 0.004 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GTAAAAAAAA (28) 66.7 0.0667 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GTTAAAAAAA (26) 15 0.015 P6.5 retina GTTTTAATTG (3) 10 0.01 P6.5 retina GTTCTGGTGG (7) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GTAAAAAAAA (28) 26 0.026 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GTTAAAAAAA (26) 5.6 0.0056 P10.5 crx- retina GTTCTGGTGG (7) 3.7 0.0037 P10.5 crx- retina TGCCACCACC (8) 3.7 0.0037 P10.5 crx- retina GTTTTAATTC (8) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GTAAAAAAAA (28) 55.8 0.0558 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina GTTAAAAAAA (26) 15.4 0.0154 P10.5 crx+ retina TGCCACCACC (8) 5.8 0.0058 P10.5 crx+ retina GTTTTAATTG (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GTAAAAAAAA (28) 22.2 0.0222 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TGCCACCACC (8) 7.4 0.0074 Adult retinal GTTTTAATTG (3) 5.6 0.0056 Adult retinal GTTCTGGTGG (7) 1.9 0.0019 Adult retinal GTTTTAATGT (4) 1.9 0.0019 Adult retinal TTTCGGAGTC (3) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GTAAAAAAAA (28) 24.9 0.0249 ONL TGCCACCACC (8) 9.6 0.0096 ONL GTTAAAAAAA (26) 3.8 0.0038 ONL GTTCTGGTGG (7) 1.9 0.0019