Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.930	Ctsl	cathepsin L	13	13 30.0 cM	13039
Gene Ontology	actinidain activity | cathepsin L activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | extracellular space | hydrolase activity | lysosome | peptidase activity | proteolysis and peptidolysis
Human Homolog	CTSL2[cathepsin L2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTAAATGT 11.4 0.0114 P8 Cb GC GAGATGAACG (2) 1.6 0.0016 Cb medulloblastoma GGTTAAATGT 9.2 0.0092 P8 GC+1d culture GGTTAAATGT 22.8 0.0228 P8 GC+1d culture GGGGTTCTGT 1.1 0.0011 P8 GC+1d culture GGGTTCTGTT (2) 1.1 0.0011 P8 GC+SHH+1d culture GGTTAAATGT 8.2 0.0082 P8 GC+SHH+1d culture GATTGTTCCT 1.2 0.0012 3T3 fibroblasts GGTTAAATGT 17.5 0.0175 Hypothalamus GAGATGAACG (2) 1.8 0.0018 E12.5 retina GATTGTTCCT 1.9 0.0019 E12.5 retina GGGTTCTGTT (2) 1.9 0.0019 E12.5 retina GGTTAAATGT 1.9 0.0019 E14.5 retina GGTTAAATGT 3.6 0.0036 E16.5 retina GGTTAAATGT 5.4 0.0054 E16.5 retina ATTTGAATTC 3.6 0.0036 E18.5 retina GGTTAAATGT 1.8 0.0018 P0.5 retina GGTTAAATGT 7.9 0.0079 P0.5 retina GATTGTTCCT 2 0.002 P2.5 retina GGTTAAATGT 5.3 0.0053 P2.5 retina GGGGTTCTGT 1.8 0.0018 P4.5 retina GGTTAAATGT 4 0.004 P6.5 retina GGTTAAATGT 8.3 0.0083 P6.5 retina ATTTGAATTC 1.7 0.0017 P10.5 crx- retina GGTTAAATGT 18.6 0.0186 P10.5 crx- retina ATTTGAATTC 1.9 0.0019 P10.5 crx- retina GAGATGAACG (2) 1.9 0.0019 P10.5 crx- retina GGGGTTCTGT 1.9 0.0019 P10.5 crx- retina GGGTTCTGTT (2) 1.9 0.0019 P10.5 crx+ retina GGTTAAATGT 9.6 0.0096 Adult retinal GGTTAAATGT 5.6 0.0056 ONL GATTGTTCCT 1.9 0.0019 ONL GGTTAAATGT 1.9 0.0019