Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.121265	Psma1	proteasome (prosome, macropain) subunit, alpha type 1	7	7 53.0 cM	26440
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | membrane | peptidase activity | proteasome core complex (sensu Eukarya) | transport | transporter activity | ubiquitin-dependent protein catabolism
Human Homolog	PSMA1[proteasome (prosome, macropain) subunit, alpha type, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCTGCGTGC 9.8 0.0098 P8 Cb GC AACAAAAAAA (18) 4.9 0.0049 P8 Cb GC ATGATGATGA (16) 3.3 0.0033 P8 Cb GC GAAACATTCT (7) 1.6 0.0016 P8 Cb GC GGCCTTCCAA (5) 1.6 0.0016 P8 Cb GC TTCTGTTTTT (3) 1.6 0.0016 P8 Cb GC TTGACAACCA (2) 1.6 0.0016 P8 Cb GC TTTATTAAAA (6) 1.6 0.0016 Cb medulloblastoma AACAAAAAAA (18) 9.2 0.0092 Cb medulloblastoma ATGATGATGA (16) 2.3 0.0023 Cb medulloblastoma GAAACATTCT (7) 2.3 0.0023 Cb medulloblastoma GGCCTTCCAA (5) 2.3 0.0023 Cb medulloblastoma GTCTGCGTGC 2.3 0.0023 Cb medulloblastoma TTCTGTTTTT (3) 2.3 0.0023 Cb medulloblastoma TTGAAAACCA (2) 2.3 0.0023 P8 GC+1d culture GTCTGCGTGC 5.7 0.0057 P8 GC+1d culture GCCCCTAAAA (6) 4.6 0.0046 P8 GC+1d culture TGTGTGGTTG (3) 4.6 0.0046 P8 GC+1d culture TTTATTAAAA (6) 4.6 0.0046 P8 GC+1d culture AACAAAAAAA (18) 3.4 0.0034 P8 GC+1d culture ATGATGATGA (16) 1.1 0.0011 P8 GC+1d culture CAGAGCAGAC (2) 1.1 0.0011 P8 GC+SHH+1d culture GTCTGCGTGC 7 0.007 P8 GC+SHH+1d culture AACAAAAAAA (18) 5.9 0.0059 P8 GC+SHH+1d culture ATGATGATGA (16) 3.5 0.0035 P8 GC+SHH+1d culture TTTATTAAAA (6) 2.3 0.0023 P8 GC+SHH+1d culture GAAACATTCT (7) 1.2 0.0012 P8 GC+SHH+1d culture GCCCCTAAAA (6) 1.2 0.0012 3T3 fibroblasts GTCTGCGTGC 24.5 0.0245 E15 cortex GTCTGCGTGC 19.8 0.0198 E15 cortex AACAAAAAAA (18) 4.9 0.0049 P1 cortex GTCTGCGTGC 9.1 0.0091 P1 cortex GTGGGCGGTG (2) 9.1 0.0091 P1 cortex GAAACATTCT (7) 4.5 0.0045 Hypothalamus TTTATTAAAA (6) 3.6 0.0036 Hypothalamus AACAAAAAAA (18) 1.8 0.0018 Hypothalamus GTCTGCGTGC 1.8 0.0018 E12.5 retina ATGATGATGA (16) 9.4 0.0094 E12.5 retina AACAAAAAAA (18) 3.8 0.0038 E12.5 retina GTCTGCGTGC 3.8 0.0038 E12.5 retina CAGAGCAGAC (2) 1.9 0.0019 E12.5 retina TTGAAAACCA (2) 1.9 0.0019 E14.5 retina TTTATTAAAA (6) 7.3 0.0073 E14.5 retina ATGATGATGA (16) 3.6 0.0036 E14.5 retina AACAAAAAAA (18) 1.8 0.0018 E14.5 retina GAAACATTCT (7) 1.8 0.0018 E16.5 retina ATGATGATGA (16) 3.6 0.0036 E16.5 retina GTCTGCGTGC 3.6 0.0036 E16.5 retina GAAACATTCT (7) 1.8 0.0018 E16.5 retina GGCCTTCCAA (5) 1.8 0.0018 E16.5 retina GTGGGCGGTG (2) 1.8 0.0018 E16.5 retina TTTATTAAAA (6) 1.8 0.0018 E18.5 retina ATGATGATGA (16) 7.3 0.0073 E18.5 retina AACAAAAAAA (18) 5.5 0.0055 E18.5 retina GTCTGCGTGC 3.6 0.0036 E18.5 retina TTGAAAACCA (2) 1.8 0.0018 E18.5 retina TTGACAACCA (2) 1.8 0.0018 P0.5 retina ATGATGATGA (16) 9.8 0.0098 P0.5 retina GTCTGCGTGC 9.8 0.0098 P0.5 retina AACAAAAAAA (18) 2 0.002 P0.5 retina TTTATTAAAA (6) 2 0.002 P2.5 retina ATGATGATGA (16) 17.6 0.0176 P2.5 retina AACAAAAAAA (18) 3.5 0.0035 P2.5 retina GGCCTTCCAA (5) 1.8 0.0018 P2.5 retina GTCTGCGTGC 1.8 0.0018 P4.5 retina AACAAAAAAA (18) 4 0.004 P4.5 retina CAGAGCAGAC (2) 2 0.002 P4.5 retina GAAACATTCT (7) 2 0.002 P4.5 retina GTCTGCGTGC 2 0.002 P4.5 retina TTTATTAAAA (6) 2 0.002 P6.5 retina TTTATTAAAA (6) 8.3 0.0083 P6.5 retina ATGATGATGA (16) 5 0.005 P6.5 retina CAGAGCAGAC (2) 1.7 0.0017 P6.5 retina GTCTGCGTGC 1.7 0.0017 P6.5 retina TTGACAACCA (2) 1.7 0.0017 P10.5 crx- retina AACAAAAAAA (18) 3.7 0.0037 P10.5 crx- retina GTGGGCGGTG (2) 3.7 0.0037 P10.5 crx- retina GAAACATTCT (7) 1.9 0.0019 P10.5 crx- retina GTCTGCGTGC 1.9 0.0019 P10.5 crx- retina TTCTGTTTTT (3) 1.9 0.0019 P10.5 crx- retina TTTATTAAAA (6) 1.9 0.0019 P10.5 crx+ retina TTTATTAAAA (6) 7.7 0.0077 P10.5 crx+ retina GTCTGCGTGC 5.8 0.0058 P10.5 crx+ retina GAAACATTCT (7) 3.8 0.0038 P10.5 crx+ retina AACAAAAAAA (18) 1.9 0.0019 P10.5 crx+ retina GTGGGCGGTG (2) 1.9 0.0019 Adult retinal GTCTGCGTGC 5.6 0.0056 Adult retinal GGCCTTCCAA (5) 3.7 0.0037 ONL ATGATGATGA (16) 3.8 0.0038 ONL GTCTGCGTGC 1.9 0.0019 ONL TTTATTAAAA (6) 1.9 0.0019