Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.195036	8030451N04Rik	RIKEN cDNA 8030451N04 gene	3		320735
Mm.195036	Trim33	tripartite motif protein 33	3		94093
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	TRIM33[tripartite motif-containing 33]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTCTTTGG (5) 14.7 0.0147 P8 Cb GC AAAAGAAAAA (21) 1.6 0.0016 Cb medulloblastoma AAAAGAAAAA (21) 11.6 0.0116 Cb medulloblastoma GACTGGGGGC (3) 2.3 0.0023 P8 GC+1d culture TCTTCTTTGG (5) 5.7 0.0057 P8 GC+1d culture AAAAGAAAAA (21) 1.1 0.0011 P8 GC+SHH+1d culture TCTTCTTTGG (5) 11.7 0.0117 P8 GC+SHH+1d culture AAAAGAAAAA (21) 3.5 0.0035 3T3 fibroblasts GACTGGGGGC (3) 7 0.007 3T3 fibroblasts TCTTCTTTGG (5) 7 0.007 E15 cortex GACTGGGGGC (3) 4.9 0.0049 P1 cortex TCTTCTTTGG (5) 9.1 0.0091 P1 cortex TTTTCTTTGG (8) 4.5 0.0045 E12.5 retina TCTTCTTTGG (5) 16.9 0.0169 E12.5 retina GACTGGGGGC (3) 1.9 0.0019 E12.5 retina TTTTCTTTGG (8) 1.9 0.0019 E14.5 retina TCTTCTTTGG (5) 16.4 0.0164 E14.5 retina GACTGGGGGC (3) 3.6 0.0036 E16.5 retina TCTTCTTTGG (5) 10.9 0.0109 E18.5 retina TCTTCTTTGG (5) 12.7 0.0127 E18.5 retina AAAAGAAAAA (21) 5.5 0.0055 E18.5 retina TTTTCTTTGG (8) 1.8 0.0018 P0.5 retina GACTGGGGGC (3) 3.9 0.0039 P0.5 retina TCTTCTTTGG (5) 3.9 0.0039 P2.5 retina TCTTCTTTGG (5) 7 0.007 P2.5 retina AAAAGAAAAA (21) 3.5 0.0035 P2.5 retina TTTTCTTTGG (8) 1.8 0.0018 P4.5 retina AAAAGAAAAA (21) 9.9 0.0099 P4.5 retina TCTTCTTTGG (5) 7.9 0.0079 P4.5 retina GACTGGGGGC (3) 2 0.002 P6.5 retina TCTTCTTTGG (5) 8.3 0.0083 P6.5 retina GACTGGGGGC (3) 1.7 0.0017 P10.5 crx- retina AAAAGAAAAA (21) 1.9 0.0019 P10.5 crx- retina TCTTCTTTGG (5) 1.9 0.0019 P10.5 crx+ retina AAAAGAAAAA (21) 1.9 0.0019 Adult retinal AAAAGAAAAA (21) 1.9 0.0019 Adult retinal TCTTCTTTGG (5) 1.9 0.0019 Adult retinal TTTTCTTTGG (8) 1.9 0.0019 ONL AAAAGAAAAA (21) 5.7 0.0057 ONL TCTTCTTTGG (5) 1.9 0.0019