Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19806	Hdac2	histone deacetylase 2	10	10 B1 (10 26.0 cM)	15182
Gene Ontology	chromatin modification | heterochromatin | histone deacetylase activity | hydrolase activity | nucleus | protein binding | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	HDAC2[histone deacetylase 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 12 In Situ Hybridization Images

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SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTTATGTGA 16.3 0.0163 P8 Cb GC AAGACAGTGG (10) 9.8 0.0098 P8 Cb GC GACTGTATTT (2) 3.3 0.0033 P8 Cb GC GTGATGGTGT (2) 3.3 0.0033 P8 Cb GC AAAAAAAATA (12) 1.6 0.0016 P8 Cb GC AAGCCTCATA (2) 1.6 0.0016 P8 Cb GC CCAAAACAGT 1.6 0.0016 Cb medulloblastoma AAAAAAAATA (12) 4.6 0.0046 Cb medulloblastoma AAGACAGTGG (10) 2.3 0.0023 P8 GC+1d culture CTTTATGTGA 10.3 0.0103 P8 GC+1d culture AAGACAGTGG (10) 4.6 0.0046 P8 GC+1d culture GACTGTATTT (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAATA (12) 1.1 0.0011 P8 GC+1d culture AAGAAAACAG (16) 1.1 0.0011 P8 GC+1d culture GAGACAGTGG (2) 1.1 0.0011 P8 GC+SHH+1d culture CTTTATGTGA 7 0.007 P8 GC+SHH+1d culture GACTGTATTT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGACAGTGG (10) 1.2 0.0012 P8 GC+SHH+1d culture CCAAAACAGT 1.2 0.0012 3T3 fibroblasts GAGACAGTGG (2) 3.5 0.0035 E15 cortex CTTTATGTGA 4.9 0.0049 P1 cortex CTTTATGTGA 13.6 0.0136 P1 cortex GACTGTATTT (2) 4.5 0.0045 P1 cortex GAGACAGTGG (2) 4.5 0.0045 Hypothalamus TTTAAAAACA (3) 1.8 0.0018 E12.5 retina AAGACAGTGG (10) 5.6 0.0056 E12.5 retina CTTTATGTGA 5.6 0.0056 E12.5 retina GACTGTATTT (2) 1.9 0.0019 E14.5 retina CCAAAACAGT 3.6 0.0036 E14.5 retina AAGCCTCATA (2) 1.8 0.0018 E14.5 retina CTTTATGTGA 1.8 0.0018 E14.5 retina GGAGGGGAGG (7) 1.8 0.0018 E16.5 retina CTTTATGTGA 5.4 0.0054 E16.5 retina GACTGTATTT (2) 5.4 0.0054 E16.5 retina AAGACAGTGG (10) 3.6 0.0036 E16.5 retina AAAAAAAATA (12) 1.8 0.0018 E16.5 retina GTGATGGTGT (2) 1.8 0.0018 E18.5 retina CTTTATGTGA 12.7 0.0127 E18.5 retina AAAAAAAATA (12) 3.6 0.0036 E18.5 retina AAGACAGTGG (10) 1.8 0.0018 P0.5 retina CTTTATGTGA 7.9 0.0079 P0.5 retina AAGCCTCATA (2) 2 0.002 P0.5 retina TTTAAAAACA (3) 2 0.002 P2.5 retina CTTTATGTGA 14.1 0.0141 P2.5 retina GACTGTATTT (2) 1.8 0.0018 P4.5 retina AAAAAAAATA (12) 5.9 0.0059 P4.5 retina CTTTATGTGA 5.9 0.0059 P4.5 retina AAGACAGTGG (10) 4 0.004 P4.5 retina GGAGGGGAGG (7) 2 0.002 P6.5 retina AAGAAAACAG (16) 1.7 0.0017 P6.5 retina CTTTATGTGA 1.7 0.0017 P10.5 crx- retina CTTTATGTGA 9.3 0.0093 P10.5 crx- retina GACTGTATTT (2) 1.9 0.0019 P10.5 crx+ retina CTTTATGTGA 5.8 0.0058 Adult retinal CTTTATGTGA 3.7 0.0037 Adult retinal AAGAAAACAG (16) 1.9 0.0019 Adult retinal GACTGTATTT (2) 1.9 0.0019 Adult retinal GGAGGGGAGG (7) 1.9 0.0019 ONL AAAAAAAATA (12) 5.7 0.0057 ONL AAGACAGTGG (10) 1.9 0.0019 ONL CTTTATGTGA 1.9 0.0019 ONL GACTGTATTT (2) 1.9 0.0019 ONL TTTAAAAACA (3) 1.9 0.0019