Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.201455	1700042D18Rik	RIKEN cDNA 1700042D18 gene	13		67324
Mm.201455	Scamp1	secretory carrier membrane protein 1	13		107767
Gene Ontology	exocytosis | integral to membrane | protein transport | synaptic vesicle | synaptic vesicle membrane | transport | zymogen granule membrane
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTCAGTGG (4) 6.5 0.0065 P8 Cb GC GTTAAAAAAA (26) 4.9 0.0049 P8 Cb GC CCTTTGATCC (22) 3.3 0.0033 P8 Cb GC CATAAATAAA (3) 1.6 0.0016 P8 Cb GC GGAGAAAAAA (15) 1.6 0.0016 Cb medulloblastoma GTTAAAAAAA (26) 25.4 0.0254 Cb medulloblastoma GGAGAAAAAA (15) 9.2 0.0092 Cb medulloblastoma TTTTCAGTGG (4) 6.9 0.0069 Cb medulloblastoma CCTTTGATCC (22) 2.3 0.0023 Cb medulloblastoma TCACGTCTTA (3) 2.3 0.0023 Cb medulloblastoma TGACACCGGG (2) 2.3 0.0023 P8 GC+1d culture GTTAAAAAAA (26) 13.7 0.0137 P8 GC+1d culture TTTTCAGTGG (4) 8 0.008 P8 GC+1d culture CCTTTGATCC (22) 1.1 0.0011 P8 GC+SHH+1d culture GTTAAAAAAA (26) 16.4 0.0164 P8 GC+SHH+1d culture TTTTCAGTGG (4) 5.9 0.0059 P8 GC+SHH+1d culture CCTTTGATCC (22) 1.2 0.0012 P8 GC+SHH+1d culture GCTGCAGTAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAGAAAAAA (15) 1.2 0.0012 P8 GC+SHH+1d culture TGACACCGGG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGCTGCT (5) 1.2 0.0012 3T3 fibroblasts GGTGGGTGGT (2) 3.5 0.0035 E15 cortex TCACGTCTTA (3) 4.9 0.0049 E15 cortex TGACACCGGG (2) 4.9 0.0049 E15 cortex TGTGGCTGCT (5) 4.9 0.0049 P1 cortex CCTTTGATCC (22) 13.6 0.0136 P1 cortex TTTTCAGTGG (4) 9.1 0.0091 P1 cortex GTTAAAAAAA (26) 4.5 0.0045 Hypothalamus GTTAAAAAAA (26) 9.1 0.0091 Hypothalamus TTTTCAGTGG (4) 7.2 0.0072 Hypothalamus TGTGGCTGCT (5) 3.6 0.0036 Hypothalamus GAGGGCGTTT (2) 1.8 0.0018 Hypothalamus TCACGTCTTA (3) 1.8 0.0018 E12.5 retina CCTTTGATCC (22) 5.6 0.0056 E12.5 retina GTTAAAAAAA (26) 3.8 0.0038 E12.5 retina GCTGCAGTAA (2) 1.9 0.0019 E14.5 retina GTTAAAAAAA (26) 20 0.02 E14.5 retina GCTGTAAAGC (2) 3.6 0.0036 E14.5 retina CCTTTGATCC (22) 1.8 0.0018 E14.5 retina GAGGGCGTTT (2) 1.8 0.0018 E14.5 retina TGTGGCTGCT (5) 1.8 0.0018 E16.5 retina GTTAAAAAAA (26) 16.3 0.0163 E16.5 retina CCTTTGATCC (22) 3.6 0.0036 E16.5 retina TGTGGCTGCT (5) 3.6 0.0036 E18.5 retina GTTAAAAAAA (26) 27.3 0.0273 E18.5 retina GGTGGGTGGT (2) 3.6 0.0036 E18.5 retina CCTTTGATCC (22) 1.8 0.0018 E18.5 retina TGTGGCTGCT (5) 1.8 0.0018 E18.5 retina TTTTCAGTGG (4) 1.8 0.0018 P0.5 retina GTTAAAAAAA (26) 3.9 0.0039 P0.5 retina TTTTCAGTGG (4) 3.9 0.0039 P0.5 retina CATAAATAAA (3) 2 0.002 P0.5 retina CCTTTGATCC (22) 2 0.002 P0.5 retina GCTGTAAAGC (2) 2 0.002 P2.5 retina TTTTCAGTGG (4) 8.8 0.0088 P2.5 retina CCTTTGATCC (22) 7 0.007 P2.5 retina GTTAAAAAAA (26) 7 0.007 P2.5 retina GAGGGCGTTT (2) 1.8 0.0018 P2.5 retina GGAGAAAAAA (15) 1.8 0.0018 P4.5 retina GTTAAAAAAA (26) 11.9 0.0119 P4.5 retina TTTTCAGTGG (4) 7.9 0.0079 P4.5 retina CCTTTGATCC (22) 5.9 0.0059 P4.5 retina CATAAATAAA (3) 2 0.002 P4.5 retina TGACACCGGG (2) 2 0.002 P4.5 retina TGTGGCTGCT (5) 2 0.002 P6.5 retina GTTAAAAAAA (26) 15 0.015 P6.5 retina TTTTCAGTGG (4) 15 0.015 P6.5 retina TGTGGCTGCT (5) 5 0.005 P6.5 retina CCTTTGATCC (22) 3.3 0.0033 P6.5 retina GGAGAAAAAA (15) 1.7 0.0017 P10.5 crx- retina TTTTCAGTGG (4) 7.4 0.0074 P10.5 crx- retina GTTAAAAAAA (26) 5.6 0.0056 P10.5 crx+ retina GTTAAAAAAA (26) 15.4 0.0154 P10.5 crx+ retina TTTTCAGTGG (4) 9.6 0.0096 P10.5 crx+ retina CCTTTGATCC (22) 5.8 0.0058 P10.5 crx+ retina GCTGTAAAGC (2) 5.8 0.0058 Adult retinal TTTTCAGTGG (4) 3.7 0.0037 Adult retinal CATAAATAAA (3) 1.9 0.0019 Adult retinal GCTGCAGTAA (2) 1.9 0.0019 Adult retinal GCTGTAAAGC (2) 1.9 0.0019 Adult retinal GGAGAAAAAA (15) 1.9 0.0019 Adult retinal TGTGGCTGCT (5) 1.9 0.0019 ONL CCTTTGATCC (22) 5.7 0.0057 ONL TTTTCAGTGG (4) 5.7 0.0057 ONL GTTAAAAAAA (26) 3.8 0.0038