Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257266	2300010F08Rik	RIKEN cDNA 2300010F08 gene	4		71875
Mm.257266	9430087B15Rik	RIKEN cDNA 9430087B15 gene	4		77438
Mm.257266	Epha7	Eph receptor A7	4	4 1.9 cM	13841
Gene Ontology	ATP binding | ephrin receptor activity | extracellular space | integral to membrane | kinase activity | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | transferase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	EPHA7[EphA7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTAAAAAAA (26) 4.9 0.0049 P8 Cb GC AGCCAGCCAC (4) 1.6 0.0016 P8 Cb GC TTGGAAATCT (9) 1.6 0.0016 Cb medulloblastoma GTTAAAAAAA (26) 25.4 0.0254 Cb medulloblastoma GACTGCTATG (4) 9.2 0.0092 Cb medulloblastoma CTTCTGGGTG (5) 2.3 0.0023 P8 GC+1d culture GTTAAAAAAA (26) 13.7 0.0137 P8 GC+1d culture AGCCAGCCAC (4) 2.3 0.0023 P8 GC+1d culture AAAATGCTCT (3) 1.1 0.0011 P8 GC+1d culture CTTCTGGGTG (5) 1.1 0.0011 P8 GC+SHH+1d culture GTTAAAAAAA (26) 16.4 0.0164 P8 GC+SHH+1d culture CTTCTGGGTG (5) 2.3 0.0023 P1 cortex AAAATGCTCT (3) 4.5 0.0045 P1 cortex GAAAGATTGT (3) 4.5 0.0045 P1 cortex GTTAAAAAAA (26) 4.5 0.0045 Hypothalamus GTTAAAAAAA (26) 9.1 0.0091 Hypothalamus GAAAGATTGT (3) 1.8 0.0018 Hypothalamus TTGGAAATCT (9) 1.8 0.0018 E12.5 retina GTTAAAAAAA (26) 3.8 0.0038 E12.5 retina GGGAACTTGG (3) 1.9 0.0019 E12.5 retina TTGGAAATCT (9) 1.9 0.0019 E14.5 retina GTTAAAAAAA (26) 20 0.02 E14.5 retina AGCCAGCCAC (4) 1.8 0.0018 E14.5 retina CAGACAGAGT (5) 1.8 0.0018 E16.5 retina GTTAAAAAAA (26) 16.3 0.0163 E16.5 retina GAAAGATTGT (3) 3.6 0.0036 E16.5 retina TTGGAAATCT (9) 1.8 0.0018 E18.5 retina GTTAAAAAAA (26) 27.3 0.0273 E18.5 retina TTGGAAATCT (9) 1.8 0.0018 P0.5 retina GTTAAAAAAA (26) 3.9 0.0039 P2.5 retina GTTAAAAAAA (26) 7 0.007 P2.5 retina CAGACAGAGT (5) 1.8 0.0018 P4.5 retina GTTAAAAAAA (26) 11.9 0.0119 P4.5 retina CAGACAGAGT (5) 2 0.002 P6.5 retina GTTAAAAAAA (26) 15 0.015 P6.5 retina CAGACAGAGT (5) 1.7 0.0017 P6.5 retina TTGGAAATCT (9) 1.7 0.0017 P10.5 crx- retina GTTAAAAAAA (26) 5.6 0.0056 P10.5 crx- retina AAAATGCTCT (3) 1.9 0.0019 P10.5 crx- retina TTGGAAATCT (9) 1.9 0.0019 P10.5 crx+ retina GTTAAAAAAA (26) 15.4 0.0154 P10.5 crx+ retina GGGAACTTGG (3) 3.8 0.0038 P10.5 crx+ retina AAAATGCTCT (3) 1.9 0.0019 P10.5 crx+ retina GACTGCTATG (4) 1.9 0.0019 Adult retinal CAGACAGAGT (5) 1.9 0.0019 Adult retinal CTTCTGGGTG (5) 1.9 0.0019 ONL GTTAAAAAAA (26) 3.8 0.0038 ONL CAGACAGAGT (5) 1.9 0.0019