Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277498	Psap	prosaposin	10	10 35.0 cM	19156
Gene Ontology	extracellular space | lipid metabolism | lysosome | mitochondrion | sphingolipid metabolism
Human Homolog	PSAP[prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 310 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACGGCTTTC (4) 106 0.106 P8 Cb GC TTGATGCCAT (2) 16.3 0.0163 P8 Cb GC AACTGAGGGG (2) 9.8 0.0098 P8 Cb GC AGGGAGCTAC 4.9 0.0049 P8 Cb GC GCCTCGGGGG (2) 4.9 0.0049 P8 Cb GC TAAACTTTGG (3) 4.9 0.0049 P8 Cb GC TAAGAGGTGC (2) 4.9 0.0049 P8 Cb GC AAGGAGTACC (2) 3.3 0.0033 P8 Cb GC AATTAAGGGG (3) 3.3 0.0033 P8 Cb GC ACCTCCAGCC (7) 1.6 0.0016 P8 Cb GC CAGGATCAGC 1.6 0.0016 P8 Cb GC CGCACTGCTC (2) 1.6 0.0016 P8 Cb GC GAGAAATCCT (2) 1.6 0.0016 P8 Cb GC GCTTCTGGGG (6) 1.6 0.0016 P8 Cb GC GTGGGGAAAA (7) 1.6 0.0016 P8 Cb GC TCCAAAATTC (4) 1.6 0.0016 P8 Cb GC TGCCTCCTCA (2) 1.6 0.0016 P8 Cb GC TGCTCCTCAG (4) 1.6 0.0016 P8 Cb GC TTCGCTGCCA (8) 1.6 0.0016 P8 Cb GC TTGGTGGGAC (3) 1.6 0.0016 Cb medulloblastoma AACTGAGGGG (2) 67.1 0.0671 Cb medulloblastoma TAAGAGGTGC (2) 43.9 0.0439 Cb medulloblastoma TTGATGCCAT (2) 13.9 0.0139 Cb medulloblastoma AGGGAGCTAC 11.6 0.0116 Cb medulloblastoma AAAACACACA (14) 4.6 0.0046 Cb medulloblastoma AAGGAGTACC (2) 4.6 0.0046 Cb medulloblastoma CAGGATCAGC 4.6 0.0046 Cb medulloblastoma TAAACTTTGG (3) 4.6 0.0046 Cb medulloblastoma TCAAGCAAAA 4.6 0.0046 Cb medulloblastoma TGTGGAACTA (2) 4.6 0.0046 Cb medulloblastoma AGGTGAACAG (3) 2.3 0.0023 Cb medulloblastoma CACCCCAGGA (2) 2.3 0.0023 Cb medulloblastoma CTCCTCTCCC (2) 2.3 0.0023 Cb medulloblastoma GTGCTGCCTG (3) 2.3 0.0023 Cb medulloblastoma GTGGGGAAAA (7) 2.3 0.0023 Cb medulloblastoma TGCTCCTCAG (4) 2.3 0.0023 Cb medulloblastoma TTCGCTGCCA (8) 2.3 0.0023 Cb medulloblastoma TTGGTGGGAC (3) 2.3 0.0023 P8 GC+1d culture AACTGAGGGG (2) 79.9 0.0799 P8 GC+1d culture CACGGCTTTC (4) 67.4 0.0674 P8 GC+1d culture TTGATGCCAT (2) 37.7 0.0377 P8 GC+1d culture TAAGAGGTGC (2) 25.1 0.0251 P8 GC+1d culture GCCTCGGGGG (2) 10.3 0.0103 P8 GC+1d culture AGGTGAACAG (3) 5.7 0.0057 P8 GC+1d culture AAGGAGTACC (2) 3.4 0.0034 P8 GC+1d culture CAACACAAAT 3.4 0.0034 P8 GC+1d culture TAAACTTTGG (3) 3.4 0.0034 P8 GC+1d culture ACTCCAGCCT (5) 2.3 0.0023 P8 GC+1d culture ACTTCAGCCT (4) 2.3 0.0023 P8 GC+1d culture CACCCCAGGA (2) 2.3 0.0023 P8 GC+1d culture CTCTGGGGGC (4) 2.3 0.0023 P8 GC+1d culture AATTAAGGGG (3) 1.1 0.0011 P8 GC+1d culture AGGTGAACCA (6) 1.1 0.0011 P8 GC+1d culture CCACCCTAGG (3) 1.1 0.0011 P8 GC+1d culture TAAAGAAGTG (7) 1.1 0.0011 P8 GC+1d culture TACTGCACGT (2) 1.1 0.0011 P8 GC+1d culture TGTGGAACTA (2) 1.1 0.0011 P8 GC+1d culture TTCGCTGCCA (8) 1.1 0.0011 P8 GC+SHH+1d culture CACGGCTTTC (4) 118.3 0.1183 P8 GC+SHH+1d culture AACTGAGGGG (2) 44.5 0.0445 P8 GC+SHH+1d culture TTGATGCCAT (2) 30.4 0.0304 P8 GC+SHH+1d culture GCCTCGGGGG (2) 15.2 0.0152 P8 GC+SHH+1d culture TAAGAGGTGC (2) 10.5 0.0105 P8 GC+SHH+1d culture AATTAAGGGG (3) 4.7 0.0047 P8 GC+SHH+1d culture AGGTGAACAG (3) 3.5 0.0035 P8 GC+SHH+1d culture TTCGCTGCCA (8) 3.5 0.0035 P8 GC+SHH+1d culture AAGGAGTACC (2) 2.3 0.0023 P8 GC+SHH+1d culture CAACACAAAT 2.3 0.0023 P8 GC+SHH+1d culture TAAACTTTGG (3) 2.3 0.0023 P8 GC+SHH+1d culture TGCTCCTCAG (4) 2.3 0.0023 P8 GC+SHH+1d culture ACTCCAGCCG (2) 1.2 0.0012 P8 GC+SHH+1d culture AGGGAGCTAC 1.2 0.0012 P8 GC+SHH+1d culture AGTAACCCAC (4) 1.2 0.0012 P8 GC+SHH+1d culture CTCCTCTCCC (2) 1.2 0.0012 P8 GC+SHH+1d culture TCCAAAATTC (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGAACTA (2) 1.2 0.0012 3T3 fibroblasts CACGGCTTTC (4) 133.2 0.1332 3T3 fibroblasts AACTGAGGGG (2) 59.6 0.0596 3T3 fibroblasts GCCTCGGGGG (2) 7 0.007 3T3 fibroblasts AAGGAGTACC (2) 3.5 0.0035 3T3 fibroblasts AGGTGAACCA (6) 3.5 0.0035 3T3 fibroblasts CCCGCTGGGA (2) 3.5 0.0035 3T3 fibroblasts CTCCTCTCCC (2) 3.5 0.0035 3T3 fibroblasts CTCTGGGGGC (4) 3.5 0.0035 3T3 fibroblasts TGCTCCTCAG (4) 3.5 0.0035 3T3 fibroblasts TTGATGCCAT (2) 3.5 0.0035 3T3 fibroblasts TTGGTGGGAC (3) 3.5 0.0035 E15 cortex TTGATGCCAT (2) 19.8 0.0198 E15 cortex GCCTCGGGGG (2) 14.8 0.0148 E15 cortex TAAACTTTGG (3) 9.9 0.0099 E15 cortex AACTGAGGGG (2) 4.9 0.0049 E15 cortex ACCTCCAGCC (7) 4.9 0.0049 E15 cortex ACTCCAGCCT (5) 4.9 0.0049 E15 cortex ACTCCAGCTG (4) 4.9 0.0049 E15 cortex GCTTCTGGGG (6) 4.9 0.0049 E15 cortex GTAGGAGATG 4.9 0.0049 E15 cortex TCCAAAATTC (4) 4.9 0.0049 P1 cortex AACTGAGGGG (2) 13.6 0.0136 P1 cortex CAACACAAAT 9.1 0.0091 P1 cortex AGGTGAACCA (6) 4.5 0.0045 P1 cortex CCCGCTGGGA (2) 4.5 0.0045 P1 cortex GAGACTCCTG (2) 4.5 0.0045 P1 cortex GAGACTGTCT (2) 4.5 0.0045 P1 cortex GTGCTGCCTG (3) 4.5 0.0045 P1 cortex TAAACTTTGG (3) 4.5 0.0045 P1 cortex TAAGAGGTGC (2) 4.5 0.0045 Hypothalamus AACTGAGGGG (2) 41.7 0.0417 Hypothalamus TTGATGCCAT (2) 21.7 0.0217 Hypothalamus TAAGAGGTGC (2) 10.9 0.0109 Hypothalamus AGGGAGCTAC 7.2 0.0072 Hypothalamus AGGTGAACAG (3) 7.2 0.0072 Hypothalamus GCCTCGGGGG (2) 7.2 0.0072 Hypothalamus TTGGTGGGAC (3) 7.2 0.0072 Hypothalamus CTCCTCTCCC (2) 5.4 0.0054 Hypothalamus TGCTCCTCAG (4) 5.4 0.0054 Hypothalamus TTCGCTGCCA (8) 5.4 0.0054 Hypothalamus AAGGAGTACC (2) 3.6 0.0036 Hypothalamus CGCACTGCTC (2) 3.6 0.0036 Hypothalamus TGCCTCCTCA (2) 3.6 0.0036 Hypothalamus ACCTCCAGCC (7) 1.8 0.0018 Hypothalamus CACCCCAGGA (2) 1.8 0.0018 Hypothalamus CCACCCTAGG (3) 1.8 0.0018 Hypothalamus GAGACTCCTG (2) 1.8 0.0018 Hypothalamus GCCCACTGCC (8) 1.8 0.0018 Hypothalamus TAAAGAAGTG (7) 1.8 0.0018 Hypothalamus TGATTTTATG (2) 1.8 0.0018 E12.5 retina AACTGAGGGG (2) 22.5 0.0225 E12.5 retina TTGATGCCAT (2) 16.9 0.0169 E12.5 retina GCCTCGGGGG (2) 7.5 0.0075 E12.5 retina AAGGAGTACC (2) 5.6 0.0056 E12.5 retina ACTCCAGCCT (5) 3.8 0.0038 E12.5 retina TAAACTTTGG (3) 3.8 0.0038 E12.5 retina TTCGCTGCCA (8) 3.8 0.0038 E12.5 retina AGTAACCCAC (4) 1.9 0.0019 E12.5 retina CCACCCTAGG (3) 1.9 0.0019 E12.5 retina GAGACTGTCT (2) 1.9 0.0019 E12.5 retina GTAGGAGATG 1.9 0.0019 E12.5 retina TAAGAGGTGC (2) 1.9 0.0019 E12.5 retina TACTGCACGT (2) 1.9 0.0019 E14.5 retina AACTGAGGGG (2) 27.3 0.0273 E14.5 retina TTGATGCCAT (2) 20 0.02 E14.5 retina AAGGAGTACC (2) 10.9 0.0109 E14.5 retina GCCTCGGGGG (2) 5.5 0.0055 E14.5 retina AGGGAGCTAC 3.6 0.0036 E14.5 retina AGGTGAACAG (3) 3.6 0.0036 E14.5 retina CAACACAAAT 3.6 0.0036 E14.5 retina AATTAAGGGG (3) 1.8 0.0018 E14.5 retina ACCTCCAGCC (7) 1.8 0.0018 E14.5 retina AGGTGAACCA (6) 1.8 0.0018 E14.5 retina AGTAACCCAC (4) 1.8 0.0018 E14.5 retina GCCCACTGCC (8) 1.8 0.0018 E14.5 retina GTAGGAGATG 1.8 0.0018 E14.5 retina GTGGGGAAAA (7) 1.8 0.0018 E14.5 retina TAAACTTTGG (3) 1.8 0.0018 E14.5 retina TGCTCCTCAG (4) 1.8 0.0018 E14.5 retina TTCGCTGCCA (8) 1.8 0.0018 E14.5 retina TTGGTGGGAC (3) 1.8 0.0018 E16.5 retina TTGATGCCAT (2) 25.4 0.0254 E16.5 retina AACTGAGGGG (2) 18.1 0.0181 E16.5 retina AAGGAGTACC (2) 10.9 0.0109 E16.5 retina GCCTCGGGGG (2) 7.2 0.0072 E16.5 retina TAAACTTTGG (3) 7.2 0.0072 E16.5 retina AGGTGAACAG (3) 5.4 0.0054 E16.5 retina ACTCCAGCCT (5) 3.6 0.0036 E16.5 retina TAAGAGGTGC (2) 3.6 0.0036 E16.5 retina TCCAAAATTC (4) 3.6 0.0036 E16.5 retina TGCTCCTCAG (4) 3.6 0.0036 E16.5 retina TTCGCTGCCA (8) 3.6 0.0036 E16.5 retina AAAACACACA (14) 1.8 0.0018 E16.5 retina AATTAAGGGG (3) 1.8 0.0018 E16.5 retina ACTCCAGCCG (2) 1.8 0.0018 E16.5 retina AGTAACCCAC (4) 1.8 0.0018 E16.5 retina CACCCCAGGA (2) 1.8 0.0018 E16.5 retina CCACCCTAGG (3) 1.8 0.0018 E16.5 retina CTCCTCTCCC (2) 1.8 0.0018 E16.5 retina GAGACTGTCT (2) 1.8 0.0018 E16.5 retina TACTGCACGT (2) 1.8 0.0018 E18.5 retina TTGATGCCAT (2) 27.3 0.0273 E18.5 retina AACTGAGGGG (2) 12.7 0.0127 E18.5 retina GCCTCGGGGG (2) 10.9 0.0109 E18.5 retina GAGAAATCCT (2) 3.6 0.0036 E18.5 retina TAAGAGGTGC (2) 3.6 0.0036 E18.5 retina AAAACTGTGT (7) 1.8 0.0018 E18.5 retina AGGTGAACAG (3) 1.8 0.0018 E18.5 retina AGTAACCCAC (4) 1.8 0.0018 E18.5 retina GAGACTGTCT (2) 1.8 0.0018 E18.5 retina GTCTGGAGTA (2) 1.8 0.0018 E18.5 retina TAAACTTTGG (3) 1.8 0.0018 E18.5 retina TACTGCACGT (2) 1.8 0.0018 E18.5 retina TGATTTTATG (2) 1.8 0.0018 P0.5 retina AACTGAGGGG (2) 27.5 0.0275 P0.5 retina TTGATGCCAT (2) 11.8 0.0118 P0.5 retina AAGGAGTACC (2) 7.9 0.0079 P0.5 retina GCCTCGGGGG (2) 5.9 0.0059 P0.5 retina TAAGAGGTGC (2) 5.9 0.0059 P0.5 retina AGTAACCCAC (4) 3.9 0.0039 P0.5 retina GTCTGGAGTA (2) 3.9 0.0039 P0.5 retina TAAACTTTGG (3) 3.9 0.0039 P0.5 retina TTCGCTGCCA (8) 3.9 0.0039 P0.5 retina ACCTCCAGCC (7) 2 0.002 P0.5 retina ACTTCAGCCT (4) 2 0.002 P2.5 retina TTGATGCCAT (2) 47.5 0.0475 P2.5 retina AACTGAGGGG (2) 14.1 0.0141 P2.5 retina GCCTCGGGGG (2) 10.6 0.0106 P2.5 retina TAAACTTTGG (3) 7 0.007 P2.5 retina TTCGCTGCCA (8) 5.3 0.0053 P2.5 retina AAGGAGTACC (2) 3.5 0.0035 P2.5 retina AATTAAGGGG (3) 3.5 0.0035 P2.5 retina AGTAACCCAC (4) 3.5 0.0035 P2.5 retina CAACACAAAT 3.5 0.0035 P2.5 retina GTGCCCCCCC (3) 3.5 0.0035 P2.5 retina TAAGAGGTGC (2) 3.5 0.0035 P2.5 retina AAAACTGTGT (7) 1.8 0.0018 P2.5 retina AGGTGAACAG (3) 1.8 0.0018 P2.5 retina AGGTGAACCA (6) 1.8 0.0018 P2.5 retina CACCCCAGGA (2) 1.8 0.0018 P2.5 retina CCTCTCCTGC 1.8 0.0018 P2.5 retina GAGAAATCCT (2) 1.8 0.0018 P2.5 retina GTAGGAGATG 1.8 0.0018 P2.5 retina GTGCTGCCTG (3) 1.8 0.0018 P2.5 retina GTGGGGAAAA (7) 1.8 0.0018 P2.5 retina TAAAGAAGTG (7) 1.8 0.0018 P2.5 retina TGATTTTATG (2) 1.8 0.0018 P2.5 retina TTGGTGGGAC (3) 1.8 0.0018 P4.5 retina TTGATGCCAT (2) 31.7 0.0317 P4.5 retina AACTGAGGGG (2) 25.8 0.0258 P4.5 retina TAAGAGGTGC (2) 5.9 0.0059 P4.5 retina TTCGCTGCCA (8) 5.9 0.0059 P4.5 retina GCCTCGGGGG (2) 4 0.004 P4.5 retina GTGCCCCCCC (3) 4 0.004 P4.5 retina TAAACTTTGG (3) 4 0.004 P4.5 retina AAAACTGTGT (7) 2 0.002 P4.5 retina ACTCCAGCCT (5) 2 0.002 P4.5 retina AGTAACCCAC (4) 2 0.002 P4.5 retina CAACACAAAT 2 0.002 P4.5 retina CTCCTCTCCC (2) 2 0.002 P6.5 retina AACTGAGGGG (2) 28.3 0.0283 P6.5 retina TTGATGCCAT (2) 21.7 0.0217 P6.5 retina TTCGCTGCCA (8) 8.3 0.0083 P6.5 retina TAAGAGGTGC (2) 6.7 0.0067 P6.5 retina CAACACAAAT 5 0.005 P6.5 retina GTGCTGCCTG (3) 5 0.005 P6.5 retina ACCTCCAGCC (7) 3.3 0.0033 P6.5 retina AGGTGAACAG (3) 3.3 0.0033 P6.5 retina GCCTCGGGGG (2) 3.3 0.0033 P6.5 retina GTAGGAGATG 3.3 0.0033 P6.5 retina AAGGAGTACC (2) 1.7 0.0017 P6.5 retina AATTAAGGGG (3) 1.7 0.0017 P6.5 retina AGGGAGCTAC 1.7 0.0017 P6.5 retina CCTCTCCTGC 1.7 0.0017 P6.5 retina GAGACTCCTG (2) 1.7 0.0017 P6.5 retina GCTTCTGGGG (6) 1.7 0.0017 P6.5 retina GTGCCCCCCC (3) 1.7 0.0017 P6.5 retina GTGGGGAAAA (7) 1.7 0.0017 P6.5 retina TAAACTTTGG (3) 1.7 0.0017 P6.5 retina TACTGCACGT (2) 1.7 0.0017 P10.5 crx- retina AACTGAGGGG (2) 48.3 0.0483 P10.5 crx- retina TTCGCTGCCA (8) 5.6 0.0056 P10.5 crx- retina GCCCACTGCC (8) 3.7 0.0037 P10.5 crx- retina TTGATGCCAT (2) 3.7 0.0037 P10.5 crx- retina AAGGAGTACC (2) 1.9 0.0019 P10.5 crx- retina AATTAAGGGG (3) 1.9 0.0019 P10.5 crx- retina AGGTGAACAG (3) 1.9 0.0019 P10.5 crx- retina CAACACAAAT 1.9 0.0019 P10.5 crx- retina CACCCCAGGA (2) 1.9 0.0019 P10.5 crx- retina CCCGCTGGGA (2) 1.9 0.0019 P10.5 crx- retina GCCTCGGGGG (2) 1.9 0.0019 P10.5 crx- retina GTGCTGCCTG (3) 1.9 0.0019 P10.5 crx- retina GTGGGGAAAA (7) 1.9 0.0019 P10.5 crx- retina TAAACTTTGG (3) 1.9 0.0019 P10.5 crx- retina TAAGAGGTGC (2) 1.9 0.0019 P10.5 crx+ retina AACTGAGGGG (2) 38.4 0.0384 P10.5 crx+ retina GCCTCGGGGG (2) 15.4 0.0154 P10.5 crx+ retina TTGATGCCAT (2) 15.4 0.0154 P10.5 crx+ retina CCACCCTAGG (3) 3.8 0.0038 P10.5 crx+ retina TAAGAGGTGC (2) 3.8 0.0038 P10.5 crx+ retina ACTCCAGCCT (5) 1.9 0.0019 P10.5 crx+ retina CAACACAAAT 1.9 0.0019 P10.5 crx+ retina CCTCTCCTGC 1.9 0.0019 P10.5 crx+ retina GTGCTGCCTG (3) 1.9 0.0019 P10.5 crx+ retina GTGGGGAAAA (7) 1.9 0.0019 P10.5 crx+ retina TTCGCTGCCA (8) 1.9 0.0019 Adult retinal AACTGAGGGG (2) 38.9 0.0389 Adult retinal TTGATGCCAT (2) 13 0.013 Adult retinal TAAGAGGTGC (2) 7.4 0.0074 Adult retinal ACTCCAGCTG (4) 3.7 0.0037 Adult retinal AGTAACCCAC (4) 3.7 0.0037 Adult retinal GCCTCGGGGG (2) 3.7 0.0037 Adult retinal TTGGTGGGAC (3) 3.7 0.0037 Adult retinal ACCTCCAGCC (7) 1.9 0.0019 Adult retinal ACTCCAGCCG (2) 1.9 0.0019 Adult retinal AGGGAGCTAC 1.9 0.0019 Adult retinal AGGTGAACCA (6) 1.9 0.0019 Adult retinal CCTCTCCTGC 1.9 0.0019 Adult retinal GAGAAATCCT (2) 1.9 0.0019 Adult retinal GTAGGAGATG 1.9 0.0019 Adult retinal GTGGGGAAAA (7) 1.9 0.0019 Adult retinal TAAACTTTGG (3) 1.9 0.0019 Adult retinal TCAAGCAAAA 1.9 0.0019 Adult retinal TGCCTCCTCA (2) 1.9 0.0019 ONL AACTGAGGGG (2) 21.1 0.0211 ONL ACTCCAGCTG (4) 5.7 0.0057 ONL TTGATGCCAT (2) 5.7 0.0057 ONL ACCTCCAGCC (7) 3.8 0.0038 ONL ACTCCAGCCG (2) 1.9 0.0019 ONL AGTAACCCAC (4) 1.9 0.0019 ONL CACGGCTTTC (4) 1.9 0.0019 ONL GCCTCGGGGG (2) 1.9 0.0019 ONL TCAAGCAAAA 1.9 0.0019 ONL TTGGTGGGAC (3) 1.9 0.0019