Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.295533	Flna	filamin, alpha	X	X 29.8 cM	192176
Gene Ontology	actin binding | actin binding | cytoskeleton | early endosome to late endosome transport | Golgi trans face | protein binding | protein kinase C binding
Human Homolog	FLNA[filamin A, alpha (actin binding protein 280)] | FLNA[filamin A, alpha (actin binding protein 280)] | FLNA[filamin A, alpha (actin binding protein 280)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 132 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTCTGTGG (4) 14.7 0.0147 P8 Cb GC TCTTCTTTGG (5) 14.7 0.0147 P8 Cb GC GATTGAGAAT (8) 4.9 0.0049 P8 Cb GC GAAATGAGCA (2) 3.3 0.0033 P8 Cb GC ATAATACCTA 1.6 0.0016 P8 Cb GC ATGGCACATA 1.6 0.0016 P8 Cb GC GGGAAAAAAA (36) 1.6 0.0016 P8 Cb GC GGGTGGCCAG (2) 1.6 0.0016 Cb medulloblastoma GGGAAAAAAA (36) 92.5 0.0925 Cb medulloblastoma GATTGAGAAT (8) 16.2 0.0162 Cb medulloblastoma AAGGAGTTAC (5) 9.2 0.0092 Cb medulloblastoma GAAATGAGCA (2) 6.9 0.0069 Cb medulloblastoma GTGCCTGGGC (3) 4.6 0.0046 Cb medulloblastoma TCTTCTGTGG (4) 2.3 0.0023 P8 GC+1d culture GATTGAGAAT (8) 19.4 0.0194 P8 GC+1d culture TCTTCTGTGG (4) 6.8 0.0068 P8 GC+1d culture GTGCCTGGGC (3) 5.7 0.0057 P8 GC+1d culture TCTTCTTTGG (5) 5.7 0.0057 P8 GC+1d culture GAAATGAGCA (2) 4.6 0.0046 P8 GC+1d culture AAGGAGTTAC (5) 3.4 0.0034 P8 GC+1d culture ATGGCACATA 1.1 0.0011 P8 GC+1d culture GGGAAAAAAA (36) 1.1 0.0011 P8 GC+1d culture TGGGCAAGGC (3) 1.1 0.0011 P8 GC+SHH+1d culture GATTGAGAAT (8) 19.9 0.0199 P8 GC+SHH+1d culture TCTTCTGTGG (4) 14.1 0.0141 P8 GC+SHH+1d culture TCTTCTTTGG (5) 11.7 0.0117 P8 GC+SHH+1d culture GAAATGAGCA (2) 5.9 0.0059 P8 GC+SHH+1d culture AAGGAGTTAC (5) 4.7 0.0047 P8 GC+SHH+1d culture GTGCCTGGGC (3) 2.3 0.0023 P8 GC+SHH+1d culture ATGGCACATA 1.2 0.0012 P8 GC+SHH+1d culture GGGAAAAAAA (36) 1.2 0.0012 3T3 fibroblasts TCTTCTTTGG (5) 7 0.007 3T3 fibroblasts GTGCCTGGGC (3) 3.5 0.0035 3T3 fibroblasts TCTTCTGTGG (4) 3.5 0.0035 E15 cortex GCTGCTGGAG (6) 9.9 0.0099 E15 cortex TGGGCAAGGC (3) 4.9 0.0049 P1 cortex TCTTCTTTGG (5) 9.1 0.0091 P1 cortex ATGGCACATA 4.5 0.0045 P1 cortex GGGAAAAAAA (36) 4.5 0.0045 P1 cortex TCTTCTGTGG (4) 4.5 0.0045 P1 cortex TTTTCTTTGG (8) 4.5 0.0045 Hypothalamus GGGAAAAAAA (36) 41.7 0.0417 Hypothalamus AAGGAGTTAC (5) 14.5 0.0145 Hypothalamus TCTTCTGTGG (4) 5.4 0.0054 Hypothalamus GATTGAGAAT (8) 3.6 0.0036 Hypothalamus GTGCCTGGGC (3) 3.6 0.0036 Hypothalamus AAAAAATTCA (9) 1.8 0.0018 Hypothalamus ATAATACCTA 1.8 0.0018 Hypothalamus ATGGCACATA 1.8 0.0018 E12.5 retina TCTTCTTTGG (5) 16.9 0.0169 E12.5 retina TCTTCTGTGG (4) 15 0.015 E12.5 retina GAAATGAGCA (2) 5.6 0.0056 E12.5 retina GGAACTCCTA (3) 3.8 0.0038 E12.5 retina AAGGAGTTAC (5) 1.9 0.0019 E12.5 retina ATAATACCTA 1.9 0.0019 E12.5 retina TTTTCTTTGG (8) 1.9 0.0019 E14.5 retina TCTTCTTTGG (5) 16.4 0.0164 E14.5 retina AAGGAGTTAC (5) 10.9 0.0109 E14.5 retina TCTTCTGTGG (4) 7.3 0.0073 E14.5 retina GAAATGAGCA (2) 5.5 0.0055 E14.5 retina AAAAAATTCA (9) 1.8 0.0018 E14.5 retina ATGGCACATA 1.8 0.0018 E14.5 retina GATTGAGAAT (8) 1.8 0.0018 E14.5 retina GGGAAAAAAA (36) 1.8 0.0018 E16.5 retina TCTTCTTTGG (5) 10.9 0.0109 E16.5 retina TCTTCTGTGG (4) 5.4 0.0054 E16.5 retina GGGAAAAAAA (36) 3.6 0.0036 E16.5 retina GAAATGAGCA (2) 1.8 0.0018 E16.5 retina GATTGAGAAT (8) 1.8 0.0018 E18.5 retina TCTTCTTTGG (5) 12.7 0.0127 E18.5 retina AAGGAGTTAC (5) 9.1 0.0091 E18.5 retina TCTTCTGTGG (4) 9.1 0.0091 E18.5 retina GTGCCTGGGC (3) 3.6 0.0036 E18.5 retina AAAAAATTCA (9) 1.8 0.0018 E18.5 retina GAAATGAGCA (2) 1.8 0.0018 E18.5 retina GATTGAGAAT (8) 1.8 0.0018 E18.5 retina GGGAAAAAAA (36) 1.8 0.0018 E18.5 retina TTTTCTTTGG (8) 1.8 0.0018 P0.5 retina TCTTCTGTGG (4) 7.9 0.0079 P0.5 retina GGGAAAAAAA (36) 3.9 0.0039 P0.5 retina GTGCCTGGGC (3) 3.9 0.0039 P0.5 retina TCTTCTTTGG (5) 3.9 0.0039 P0.5 retina ATGGCACATA 2 0.002 P0.5 retina GAAATGAGCA (2) 2 0.002 P0.5 retina GATTGAGAAT (8) 2 0.002 P0.5 retina TGGGCAAGGC (3) 2 0.002 P2.5 retina TCTTCTGTGG (4) 8.8 0.0088 P2.5 retina GGGAAAAAAA (36) 7 0.007 P2.5 retina TCTTCTTTGG (5) 7 0.007 P2.5 retina GATTGAGAAT (8) 1.8 0.0018 P2.5 retina GCTGCTGGAG (6) 1.8 0.0018 P2.5 retina GTGCCTGGGC (3) 1.8 0.0018 P2.5 retina TTTTCTTTGG (8) 1.8 0.0018 P4.5 retina GGGAAAAAAA (36) 9.9 0.0099 P4.5 retina TCTTCTTTGG (5) 7.9 0.0079 P4.5 retina GATTGAGAAT (8) 4 0.004 P4.5 retina GTGCCTGGGC (3) 4 0.004 P4.5 retina GAAATGAGCA (2) 2 0.002 P6.5 retina GGGAAAAAAA (36) 20 0.02 P6.5 retina TCTTCTGTGG (4) 8.3 0.0083 P6.5 retina TCTTCTTTGG (5) 8.3 0.0083 P6.5 retina AAGGAGTTAC (5) 3.3 0.0033 P6.5 retina GAAATGAGCA (2) 3.3 0.0033 P6.5 retina GGAACTCCTA (3) 3.3 0.0033 P6.5 retina ATAATACCTA 1.7 0.0017 P6.5 retina GTGCCTGGGC (3) 1.7 0.0017 P10.5 crx- retina GGGAAAAAAA (36) 11.1 0.0111 P10.5 crx- retina TCTTCTGTGG (4) 11.1 0.0111 P10.5 crx- retina GATTGAGAAT (8) 5.6 0.0056 P10.5 crx- retina GAAATGAGCA (2) 3.7 0.0037 P10.5 crx- retina GTGCCTGGGC (3) 1.9 0.0019 P10.5 crx- retina TCTTCTTTGG (5) 1.9 0.0019 P10.5 crx+ retina GGGAAAAAAA (36) 23.1 0.0231 P10.5 crx+ retina TCTTCTGTGG (4) 11.5 0.0115 P10.5 crx+ retina GATTGAGAAT (8) 7.7 0.0077 P10.5 crx+ retina ATGGCACATA 1.9 0.0019 P10.5 crx+ retina GGGTGGCCAG (2) 1.9 0.0019 P10.5 crx+ retina GTGCCTGGGC (3) 1.9 0.0019 Adult retinal GGGAAAAAAA (36) 35.2 0.0352 Adult retinal GATTGAGAAT (8) 7.4 0.0074 Adult retinal GGGTGGCCAG (2) 3.7 0.0037 Adult retinal GTGCCTGGGC (3) 3.7 0.0037 Adult retinal CAGTGTCTCT (2) 1.9 0.0019 Adult retinal TCTTCTTTGG (5) 1.9 0.0019 Adult retinal TTTTCTTTGG (8) 1.9 0.0019 ONL GGGAAAAAAA (36) 30.6 0.0306 ONL CAGTGTCTCT (2) 5.7 0.0057 ONL GAAATGAGCA (2) 3.8 0.0038 ONL GTGCCTGGGC (3) 3.8 0.0038 ONL GATTGAGAAT (8) 1.9 0.0019 ONL TCTTCTGTGG (4) 1.9 0.0019 ONL TCTTCTTTGG (5) 1.9 0.0019