Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.299566	Rps2	ribosomal protein S2	X		16898
Mm.299566	Rnu64	RNA, U64 small nucleolar			104366
Gene Ontology	biological_process unknown | small nucleolar ribonucleoprotein complex
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 145 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAGGTGACA (5) 47.3 0.0473 P8 Cb GC AGGATGCTTG (4) 4.9 0.0049 P8 Cb GC TGCCCAAGAA (4) 4.9 0.0049 P8 Cb GC AAGATCAAGT (4) 1.6 0.0016 P8 Cb GC AGACGGCATT (3) 1.6 0.0016 P8 Cb GC CAAGGGTGAC (4) 1.6 0.0016 P8 Cb GC CCAAGTGACA (8) 1.6 0.0016 P8 Cb GC CCACAGAGGC (3) 1.6 0.0016 P8 Cb GC GGCAACTTTG (8) 1.6 0.0016 Cb medulloblastoma CAAGGTGACA (5) 11.6 0.0116 Cb medulloblastoma AGGATGCTTG (4) 6.9 0.0069 Cb medulloblastoma TGCCCAAGAA (4) 6.9 0.0069 Cb medulloblastoma AAGATCAAGT (4) 4.6 0.0046 Cb medulloblastoma GAACAGTGTG (8) 2.3 0.0023 Cb medulloblastoma GGAACAGGCC (6) 2.3 0.0023 P8 GC+1d culture CAAGGTGACA (5) 45.7 0.0457 P8 GC+1d culture AGGATGCTTG (4) 5.7 0.0057 P8 GC+1d culture GGAACAGGCC (6) 2.3 0.0023 P8 GC+1d culture GGCAACTTTG (8) 2.3 0.0023 P8 GC+1d culture TGCCCAAGAA (4) 2.3 0.0023 P8 GC+1d culture TGGCTCTGTG (7) 2.3 0.0023 P8 GC+1d culture AAGATCAAGT (4) 1.1 0.0011 P8 GC+1d culture CAAGGGTGAC (4) 1.1 0.0011 P8 GC+1d culture CCAAGTGACA (8) 1.1 0.0011 P8 GC+1d culture CCACAGAGGC (3) 1.1 0.0011 P8 GC+1d culture CCAGTGCAGA (4) 1.1 0.0011 P8 GC+1d culture GAACAGTGTG (8) 1.1 0.0011 P8 GC+1d culture GTTTGTTTTG (8) 1.1 0.0011 P8 GC+SHH+1d culture CAAGGTGACA (5) 71.4 0.0714 P8 GC+SHH+1d culture AGGATGCTTG (4) 10.5 0.0105 P8 GC+SHH+1d culture GAACAGTGTG (8) 9.4 0.0094 P8 GC+SHH+1d culture AGACGGCATT (3) 2.3 0.0023 P8 GC+SHH+1d culture CCACAGAGGC (3) 2.3 0.0023 P8 GC+SHH+1d culture TGCCCAAGAA (4) 2.3 0.0023 P8 GC+SHH+1d culture CCAAGTGACA (8) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTGTATA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAACAGGCC (6) 1.2 0.0012 P8 GC+SHH+1d culture TGGCTCTGTG (7) 1.2 0.0012 3T3 fibroblasts CAAGGTGACA (5) 529.2 0.5292 3T3 fibroblasts CCAGTGCAGA (4) 14 0.014 3T3 fibroblasts AAGTAAGGCG (2) 3.5 0.0035 3T3 fibroblasts GGAACAGGCC (6) 3.5 0.0035 E15 cortex CAAGGTGACA (5) 49.5 0.0495 E15 cortex CCAGTGCAGA (4) 9.9 0.0099 E15 cortex AAGATCAAGT (4) 4.9 0.0049 P1 cortex CAAGGTGACA (5) 90.9 0.0909 P1 cortex AGGATGCTTG (4) 9.1 0.0091 Hypothalamus CAAGGTGACA (5) 16.3 0.0163 Hypothalamus TGCCCAAGAA (4) 10.9 0.0109 Hypothalamus AAGATCAAGT (4) 5.4 0.0054 Hypothalamus AGGATGCTTG (4) 3.6 0.0036 Hypothalamus CCAGTGCAGA (4) 1.8 0.0018 Hypothalamus CTGCTGTATA (2) 1.8 0.0018 Hypothalamus GAACAGTGTG (8) 1.8 0.0018 E12.5 retina CAAGGTGACA (5) 131.4 0.1314 E12.5 retina AGGATGCTTG (4) 9.4 0.0094 E12.5 retina GTTTGTTTTG (8) 7.5 0.0075 E12.5 retina GAACAGTGTG (8) 5.6 0.0056 E12.5 retina CCAGTGCAGA (4) 1.9 0.0019 E12.5 retina CTGCTGTATA (2) 1.9 0.0019 E12.5 retina TGGCTCTGTG (7) 1.9 0.0019 E14.5 retina CAAGGTGACA (5) 36.4 0.0364 E14.5 retina AGGATGCTTG (4) 7.3 0.0073 E14.5 retina CCAGTGCAGA (4) 5.5 0.0055 E14.5 retina AAGATCAAGT (4) 3.6 0.0036 E14.5 retina AGACGGCATT (3) 1.8 0.0018 E14.5 retina CCAAGTGACA (8) 1.8 0.0018 E14.5 retina GAACAGTGTG (8) 1.8 0.0018 E14.5 retina GGAACAGGCC (6) 1.8 0.0018 E14.5 retina TGCCCAAGAA (4) 1.8 0.0018 E16.5 retina CAAGGTGACA (5) 45.3 0.0453 E16.5 retina GAACAGTGTG (8) 7.2 0.0072 E16.5 retina AAGATCAAGT (4) 1.8 0.0018 E16.5 retina AGGATGCTTG (4) 1.8 0.0018 E16.5 retina CCACAGAGGC (3) 1.8 0.0018 E16.5 retina GGAACAGGCC (6) 1.8 0.0018 E16.5 retina GTGGGACTCA (3) 1.8 0.0018 E16.5 retina GTTTGTTTTG (8) 1.8 0.0018 E16.5 retina TGGCTCTGTG (7) 1.8 0.0018 E18.5 retina CAAGGTGACA (5) 27.3 0.0273 E18.5 retina TGGCTCTGTG (7) 9.1 0.0091 E18.5 retina GAACAGTGTG (8) 3.6 0.0036 E18.5 retina GGAACAGGCC (6) 3.6 0.0036 E18.5 retina AGACGGCATT (3) 1.8 0.0018 E18.5 retina AGGATGCTTG (4) 1.8 0.0018 E18.5 retina CCAAGTGACA (8) 1.8 0.0018 E18.5 retina GGCAACTTTG (8) 1.8 0.0018 P0.5 retina CAAGGTGACA (5) 115.8 0.1158 P0.5 retina TGGCTCTGTG (7) 7.9 0.0079 P0.5 retina AAGTAAGGCG (2) 3.9 0.0039 P0.5 retina AGGATGCTTG (4) 3.9 0.0039 P0.5 retina GAACAGTGTG (8) 3.9 0.0039 P0.5 retina GGCAACTTTG (8) 3.9 0.0039 P0.5 retina GTTTGTTTTG (8) 3.9 0.0039 P0.5 retina TGCCCAAGAA (4) 3.9 0.0039 P0.5 retina CAAGGTGACC (4) 2 0.002 P0.5 retina CCAAGTGACA (8) 2 0.002 P0.5 retina CTGCTGTATA (2) 2 0.002 P2.5 retina CAAGGTGACA (5) 28.2 0.0282 P2.5 retina TGGCTCTGTG (7) 10.6 0.0106 P2.5 retina AGGATGCTTG (4) 7 0.007 P2.5 retina GGAACAGGCC (6) 5.3 0.0053 P2.5 retina GAACAGTGTG (8) 3.5 0.0035 P2.5 retina CAAGGTGACC (4) 1.8 0.0018 P2.5 retina CCACAGAGGC (3) 1.8 0.0018 P2.5 retina CCAGTGCAGA (4) 1.8 0.0018 P4.5 retina CAAGGTGACA (5) 17.8 0.0178 P4.5 retina TGGCTCTGTG (7) 11.9 0.0119 P4.5 retina AGGATGCTTG (4) 7.9 0.0079 P4.5 retina AAGTAAGGCG (2) 2 0.002 P4.5 retina CAAGGGTGAC (4) 2 0.002 P4.5 retina GAACAGTGTG (8) 2 0.002 P4.5 retina GGAACAGGCC (6) 2 0.002 P6.5 retina CAAGGTGACA (5) 43.4 0.0434 P6.5 retina AGGATGCTTG (4) 10 0.01 P6.5 retina TGGCTCTGTG (7) 6.7 0.0067 P6.5 retina CCAAGTGACA (8) 1.7 0.0017 P6.5 retina GGAACAGGCC (6) 1.7 0.0017 P6.5 retina GTGGGACTCA (3) 1.7 0.0017 P6.5 retina TGCCCAAGAA (4) 1.7 0.0017 P10.5 crx- retina CAAGGTGACA (5) 37.2 0.0372 P10.5 crx- retina AGGATGCTTG (4) 11.1 0.0111 P10.5 crx- retina GGAACAGGCC (6) 5.6 0.0056 P10.5 crx- retina AAGATCAAGT (4) 1.9 0.0019 P10.5 crx- retina GAACAGTGTG (8) 1.9 0.0019 P10.5 crx- retina GTGGGACTCA (3) 1.9 0.0019 P10.5 crx- retina GTTTGTTTTG (8) 1.9 0.0019 P10.5 crx+ retina CAAGGTGACA (5) 30.8 0.0308 P10.5 crx+ retina AGGATGCTTG (4) 9.6 0.0096 P10.5 crx+ retina GAACAGTGTG (8) 1.9 0.0019 P10.5 crx+ retina TGGCTCTGTG (7) 1.9 0.0019 Adult retinal CAAGGTGACA (5) 37 0.037 Adult retinal AGGATGCTTG (4) 7.4 0.0074 Adult retinal GGAACAGGCC (6) 5.6 0.0056 Adult retinal GGCAACTTTG (8) 3.7 0.0037 Adult retinal TGCCCAAGAA (4) 3.7 0.0037 Adult retinal TGGCTCTGTG (7) 3.7 0.0037 Adult retinal CAAGGTGACC (4) 1.9 0.0019 Adult retinal GAACAGTGTG (8) 1.9 0.0019 ONL CAAGGTGACA (5) 9.6 0.0096 ONL AGACCCCGTG (2) 7.7 0.0077 ONL CCAGTGCAGA (4) 3.8 0.0038 ONL TGGCTCTGTG (7) 3.8 0.0038 ONL CCAAGTGACA (8) 1.9 0.0019 ONL GAACAGTGTG (8) 1.9 0.0019