Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329629	Snx15	sorting nexin 15	19		69024
Gene Ontology	cytosol | intracellular protein transport | intracellular signaling cascade | membrane | protein transport | protein transporter activity | transport
Human Homolog	SNX15[sorting nexin 15]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC CCTGAACACA (4) 4.9 0.0049 P8 Cb GC TGTTTTACTC 3.3 0.0033 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma CCTGAAAAAA (5) 4.6 0.0046 Cb medulloblastoma CCTGAACACA (4) 2.3 0.0023 Cb medulloblastoma TGTTTTACTC 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture CCTGAAAAAA (5) 1.1 0.0011 P8 GC+1d culture GCCCCAGCCC (13) 1.1 0.0011 P8 GC+1d culture TATTTAAATT (3) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture CTGGTCTCCA (4) 2.3 0.0023 P8 GC+SHH+1d culture CCTGAAAAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture CCTGAACACA (4) 1.2 0.0012 P8 GC+SHH+1d culture TATTTAAATT (3) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus CCTGAACACA (4) 9.1 0.0091 Hypothalamus TGTTTTACTC 1.8 0.0018 Hypothalamus TTTTTTCCCT (2) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GCCCCAGCCC (13) 11.3 0.0113 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GCCCCAGCCC (13) 3.6 0.0036 E14.5 retina TGTTTTACTC 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GCCCCAGCCC (13) 7.2 0.0072 E16.5 retina CCTGAACACA (4) 1.8 0.0018 E16.5 retina CTGGTCTCCA (4) 1.8 0.0018 E16.5 retina TTTTTTCCCT (2) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina CCTGAAAAAA (5) 5.5 0.0055 E18.5 retina CCTGAACACA (4) 5.5 0.0055 E18.5 retina GCCCCAGCCC (13) 3.6 0.0036 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina CTGGTCTCCA (4) 3.9 0.0039 P0.5 retina TGTTTTACTC 3.9 0.0039 P0.5 retina CCTGAACACA (4) 2 0.002 P0.5 retina GCCCCAGCCC (13) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GCCCCAGCCC (13) 5.3 0.0053 P2.5 retina TATTTAAATT (3) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GCCCCAGCCC (13) 5.9 0.0059 P4.5 retina TATTTAAATT (3) 5.9 0.0059 P4.5 retina CCTGAACACA (4) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina CCTGAACACA (4) 3.3 0.0033 P6.5 retina GCCCCAGCCC (13) 1.7 0.0017 P6.5 retina TATTTAAATT (3) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GCCCCAGCCC (13) 7.4 0.0074 P10.5 crx- retina TGTTTTACTC 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina CCTGAACACA (4) 7.7 0.0077 P10.5 crx+ retina GCCCCAGCCC (13) 7.7 0.0077 P10.5 crx+ retina CCTGAAAAAA (5) 1.9 0.0019 P10.5 crx+ retina TGTTTTACTC 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal CCTGAACACA (4) 5.6 0.0056 Adult retinal GCCCCAGCCC (13) 3.7 0.0037 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL CCTGAACACA (4) 1.9 0.0019 ONL GCCCCAGCCC (13) 1.9 0.0019