Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329655	Cfl1	cofilin 1, non-muscle	19		12631
Gene Ontology	actin binding | cortical actin cytoskeleton | cytoskeleton | intracellular | nucleus
Human Homolog	CFL1[cofilin 1 (non-muscle)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 227 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GAAGCAGGAC (4) 174.6 0.1746 P8 Cb GC GGATGGGGAG (5) 62 0.062 P8 Cb GC GCCTCTGGTG (11) 24.5 0.0245 P8 Cb GC TAATAAATAA (12) 19.6 0.0196 P8 Cb GC AGTGGTCAAG (2) 13.1 0.0131 P8 Cb GC GGAGCAGGAC (5) 11.4 0.0114 P8 Cb GC CTGCCAACTT 4.9 0.0049 P8 Cb GC AATTACAAGC (8) 3.3 0.0033 P8 Cb GC AAAAAGAAAA (19) 1.6 0.0016 P8 Cb GC CTGGCTGCCC (5) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAAGCAGGAC (4) 106.4 0.1064 Cb medulloblastoma GGAGCAGGAC (5) 48.6 0.0486 Cb medulloblastoma GGATGGGGAG (5) 41.6 0.0416 Cb medulloblastoma GCCTCTGGTG (11) 16.2 0.0162 Cb medulloblastoma AGTGGTCAAG (2) 13.9 0.0139 Cb medulloblastoma TAATAAATAA (12) 6.9 0.0069 Cb medulloblastoma AATCACAAGC (4) 4.6 0.0046 Cb medulloblastoma AAAAAGAAAA (19) 2.3 0.0023 Cb medulloblastoma AAGGTTCGCA 2.3 0.0023 Cb medulloblastoma CTGCCAACTT 2.3 0.0023 Cb medulloblastoma CTGGCTGCCC (5) 2.3 0.0023 Cb medulloblastoma GAGCAGGACA (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GAAGCAGGAC (4) 189.5 0.1895 P8 GC+1d culture GGATGGGGAG (5) 50.2 0.0502 P8 GC+1d culture TAATAAATAA (12) 32 0.032 P8 GC+1d culture CTGCCAACTT 22.8 0.0228 P8 GC+1d culture GCCTCTGGTG (11) 22.8 0.0228 P8 GC+1d culture AATTACAAGC (8) 12.6 0.0126 P8 GC+1d culture GGAGCAGGAC (5) 10.3 0.0103 P8 GC+1d culture AGTGGTCAAG (2) 2.3 0.0023 P8 GC+1d culture GAGCAGGACA (3) 2.3 0.0023 P8 GC+1d culture AAAAAGAAAA (19) 1.1 0.0011 P8 GC+1d culture GAAGCAGGGC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GAAGCAGGAC (4) 159.2 0.1592 P8 GC+SHH+1d culture GGATGGGGAG (5) 39.8 0.0398 P8 GC+SHH+1d culture TAATAAATAA (12) 32.8 0.0328 P8 GC+SHH+1d culture GCCTCTGGTG (11) 26.9 0.0269 P8 GC+SHH+1d culture CTGCCAACTT 21.1 0.0211 P8 GC+SHH+1d culture AGTGGTCAAG (2) 7 0.007 P8 GC+SHH+1d culture GGAGCAGGAC (5) 5.9 0.0059 P8 GC+SHH+1d culture AATTACAAGC (8) 3.5 0.0035 P8 GC+SHH+1d culture AAAAAGAAAA (19) 2.3 0.0023 P8 GC+SHH+1d culture AAGGTTCGCA 1.2 0.0012 P8 GC+SHH+1d culture AATCACAAGC (4) 1.2 0.0012 P8 GC+SHH+1d culture CTGGCTGCCC (5) 1.2 0.0012 P8 GC+SHH+1d culture GAGCAGGACA (3) 1.2 0.0012 3T3 fibroblasts GAAGCAGGAC (4) 115.7 0.1157 3T3 fibroblasts GCCTCTGGTG (11) 31.5 0.0315 3T3 fibroblasts GGATGGGGAG (5) 31.5 0.0315 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CTGCCAACTT 10.5 0.0105 3T3 fibroblasts GGCCTATCTC (4) 7 0.007 3T3 fibroblasts AGTGGTCAAG (2) 3.5 0.0035 E15 cortex GAAGCAGGAC (4) 217.7 0.2177 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CTGCCAACTT 19.8 0.0198 E15 cortex GGATGGGGAG (5) 14.8 0.0148 E15 cortex GGAGCAGGAC (5) 9.9 0.0099 E15 cortex AGTGGTCAAG (2) 4.9 0.0049 E15 cortex GAAACAGGAC 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GAAGCAGGAC (4) 181.8 0.1818 P1 cortex GGATGGGGAG (5) 18.2 0.0182 P1 cortex CTGCCAACTT 9.1 0.0091 P1 cortex GAAGCAGGGC (2) 9.1 0.0091 P1 cortex AATTACAAGC (8) 4.5 0.0045 P1 cortex AGTGGTCAAG (2) 4.5 0.0045 P1 cortex CTGGCTGCCC (5) 4.5 0.0045 P1 cortex GAGCAGGACA (3) 4.5 0.0045 P1 cortex GCCTCTGGTG (11) 4.5 0.0045 P1 cortex GGAGCAGGAC (5) 4.5 0.0045 Hypothalamus GAAGCAGGAC (4) 182.9 0.1829 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TAATAAATAA (12) 43.5 0.0435 Hypothalamus GGATGGGGAG (5) 38 0.038 Hypothalamus GGAGCAGGAC (5) 34.4 0.0344 Hypothalamus AGTGGTCAAG (2) 19.9 0.0199 Hypothalamus GCCTCTGGTG (11) 16.3 0.0163 Hypothalamus AATTACAAGC (8) 9.1 0.0091 Hypothalamus AAGGTTCGCA 1.8 0.0018 Hypothalamus AATCACAAGC (4) 1.8 0.0018 Hypothalamus CTGCCAACTT 1.8 0.0018 Hypothalamus CTGGCTGCCC (5) 1.8 0.0018 Hypothalamus CTTGATTCCT (3) 1.8 0.0018 E12.5 retina GAAGCAGGAC (4) 240.3 0.2403 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GGATGGGGAG (5) 105.1 0.1051 E12.5 retina GCCTCTGGTG (11) 56.3 0.0563 E12.5 retina TAATAAATAA (12) 39.4 0.0394 E12.5 retina AGTGGTCAAG (2) 13.1 0.0131 E12.5 retina AATCACAAGC (4) 5.6 0.0056 E12.5 retina AATTACAAGC (8) 5.6 0.0056 E12.5 retina GGAGCAGGAC (5) 3.8 0.0038 E12.5 retina CTGCCAACTT 1.9 0.0019 E14.5 retina GAAGCAGGAC (4) 174.9 0.1749 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TAATAAATAA (12) 60.1 0.0601 E14.5 retina GGATGGGGAG (5) 25.5 0.0255 E14.5 retina GCCTCTGGTG (11) 23.7 0.0237 E14.5 retina AGTGGTCAAG (2) 7.3 0.0073 E14.5 retina GAGCAGGACA (3) 7.3 0.0073 E14.5 retina AATTACAAGC (8) 5.5 0.0055 E14.5 retina CTTGATTCCT (3) 3.6 0.0036 E14.5 retina GGAGCAGGAC (5) 3.6 0.0036 E14.5 retina AAGGTTCGCA 1.8 0.0018 E14.5 retina CTGCCAACTT 1.8 0.0018 E14.5 retina GAAGCAGGGC (2) 1.8 0.0018 E16.5 retina GAAGCAGGAC (4) 148.5 0.1485 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GCCTCTGGTG (11) 39.8 0.0398 E16.5 retina TAATAAATAA (12) 36.2 0.0362 E16.5 retina GGATGGGGAG (5) 34.4 0.0344 E16.5 retina CTGCCAACTT 16.3 0.0163 E16.5 retina AGTGGTCAAG (2) 10.9 0.0109 E16.5 retina CTTGATTCCT (3) 5.4 0.0054 E16.5 retina GGAGCAGGAC (5) 3.6 0.0036 E16.5 retina AAAAAGAAAA (19) 1.8 0.0018 E16.5 retina AAGGTTCGCA 1.8 0.0018 E16.5 retina AATTACAAGC (8) 1.8 0.0018 E16.5 retina CACAGGGCTC (2) 1.8 0.0018 E16.5 retina GAAGCAGGGC (2) 1.8 0.0018 E16.5 retina GAGCAGGACA (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GAAGCAGGAC (4) 209.2 0.2092 E18.5 retina TAATAAATAA (12) 92.8 0.0928 E18.5 retina GGATGGGGAG (5) 54.6 0.0546 E18.5 retina GCCTCTGGTG (11) 52.8 0.0528 E18.5 retina AGTGGTCAAG (2) 14.6 0.0146 E18.5 retina CTGCCAACTT 5.5 0.0055 E18.5 retina GGAGCAGGAC (5) 5.5 0.0055 E18.5 retina GAGCAGGACA (3) 3.6 0.0036 E18.5 retina AATTACAAGC (8) 1.8 0.0018 E18.5 retina CTTGATTCCT (3) 1.8 0.0018 P0.5 retina GAAGCAGGAC (4) 135.4 0.1354 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GGATGGGGAG (5) 60.8 0.0608 P0.5 retina GCCTCTGGTG (11) 45.1 0.0451 P0.5 retina TAATAAATAA (12) 27.5 0.0275 P0.5 retina GGAGCAGGAC (5) 11.8 0.0118 P0.5 retina AAAAAGAAAA (19) 3.9 0.0039 P0.5 retina CTTGATTCCT (3) 3.9 0.0039 P0.5 retina AATTACAAGC (8) 2 0.002 P0.5 retina AGTGGTCAAG (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAAGCAGGAC (4) 200.6 0.2006 P2.5 retina GGATGGGGAG (5) 89.7 0.0897 P2.5 retina TAATAAATAA (12) 72.2 0.0722 P2.5 retina GCCTCTGGTG (11) 45.8 0.0458 P2.5 retina GGAGCAGGAC (5) 19.4 0.0194 P2.5 retina GGCCTATCTC (4) 7 0.007 P2.5 retina AATTACAAGC (8) 5.3 0.0053 P2.5 retina AGTGGTCAAG (2) 5.3 0.0053 P2.5 retina CTGCCAACTT 5.3 0.0053 P2.5 retina AAAAAGAAAA (19) 3.5 0.0035 P2.5 retina GAAGCAGGGC (2) 3.5 0.0035 P2.5 retina AATCACAAGC (4) 1.8 0.0018 P2.5 retina CTTGATTCCT (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GAAGCAGGAC (4) 247.7 0.2477 P4.5 retina TAATAAATAA (12) 77.3 0.0773 P4.5 retina GGATGGGGAG (5) 57.5 0.0575 P4.5 retina GCCTCTGGTG (11) 31.7 0.0317 P4.5 retina AGTGGTCAAG (2) 9.9 0.0099 P4.5 retina GGAGCAGGAC (5) 9.9 0.0099 P4.5 retina AAAAAGAAAA (19) 4 0.004 P4.5 retina GAGCAGGACA (3) 4 0.004 P4.5 retina AATTACAAGC (8) 2 0.002 P4.5 retina CACAGGGCTC (2) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GAAGCAGGAC (4) 158.4 0.1584 P6.5 retina GGATGGGGAG (5) 76.7 0.0767 P6.5 retina TAATAAATAA (12) 68.4 0.0684 P6.5 retina GGAGCAGGAC (5) 31.7 0.0317 P6.5 retina GCCTCTGGTG (11) 26.7 0.0267 P6.5 retina AATTACAAGC (8) 3.3 0.0033 P6.5 retina AGTGGTCAAG (2) 3.3 0.0033 P6.5 retina AATCACAAGC (4) 1.7 0.0017 P6.5 retina CTGCCAACTT 1.7 0.0017 P6.5 retina GAAACAGGAC 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GAAGCAGGAC (4) 44.6 0.0446 P10.5 crx- retina GGAGCAGGAC (5) 35.3 0.0353 P10.5 crx- retina GCCTCTGGTG (11) 18.6 0.0186 P10.5 crx- retina GGATGGGGAG (5) 16.7 0.0167 P10.5 crx- retina AATTACAAGC (8) 13 0.013 P10.5 crx- retina GAGCAGGACA (3) 11.1 0.0111 P10.5 crx- retina TAATAAATAA (12) 11.1 0.0111 P10.5 crx- retina CTGCCAACTT 9.3 0.0093 P10.5 crx- retina AGTGGTCAAG (2) 3.7 0.0037 P10.5 crx- retina AATCACAAGC (4) 1.9 0.0019 P10.5 crx- retina CTTGATTCCT (3) 1.9 0.0019 P10.5 crx- retina GAAACAGGAC 1.9 0.0019 P10.5 crx- retina GGCCTATCTC (4) 1.9 0.0019 P10.5 crx+ retina GAAGCAGGAC (4) 155.7 0.1557 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GGATGGGGAG (5) 75 0.075 P10.5 crx+ retina GCCTCTGGTG (11) 30.8 0.0308 P10.5 crx+ retina GGAGCAGGAC (5) 17.3 0.0173 P10.5 crx+ retina TAATAAATAA (12) 15.4 0.0154 P10.5 crx+ retina GAGCAGGACA (3) 3.8 0.0038 P10.5 crx+ retina AATTACAAGC (8) 1.9 0.0019 P10.5 crx+ retina AGTGGTCAAG (2) 1.9 0.0019 P10.5 crx+ retina CTGCCAACTT 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GAAGCAGGAC (4) 53.7 0.0537 Adult retinal GCCTCTGGTG (11) 24.1 0.0241 Adult retinal GGATGGGGAG (5) 18.5 0.0185 Adult retinal GGAGCAGGAC (5) 5.6 0.0056 Adult retinal TAATAAATAA (12) 5.6 0.0056 Adult retinal CTGGCTGCCC (5) 3.7 0.0037 Adult retinal AGTGGTCAAG (2) 1.9 0.0019 Adult retinal CACAGGGCTC (2) 1.9 0.0019 Adult retinal GAAACAGGAC 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GGATGGGGAG (5) 38.3 0.0383 ONL GAAGCAGGAC (4) 26.8 0.0268 ONL TAATAAATAA (12) 23 0.023 ONL GCCTCTGGTG (11) 13.4 0.0134 ONL GGAGCAGGAC (5) 7.7 0.0077 ONL AAAAAGAAAA (19) 3.8 0.0038 ONL AATCACAAGC (4) 1.9 0.0019 ONL AGTGGTCAAG (2) 1.9 0.0019 ONL GAGCAGGACA (3) 1.9 0.0019