Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.42249	2610028H22Rik	RIKEN cDNA 2610028H22 gene	9		78386
Mm.42249	D930014N22Rik	RIKEN cDNA D930014N22 gene	9		320689
Mm.42249	Neo1	neogenin	9		18007
Gene Ontology	ATP binding | cell adhesion | integral to membrane | protein amino acid phosphorylation | protein binding | vascular endothelial growth factor receptor activity
Human Homolog	NEO1[neogenin homolog 1 (chicken)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 129 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTATTTT (14) 13.1 0.0131 P8 Cb GC TTGCATTGCT (5) 11.4 0.0114 P8 Cb GC TTGGGTTTTT (9) 8.2 0.0082 P8 Cb GC GAAAAAGGAA (9) 3.3 0.0033 P8 Cb GC GTTCCTAGGA (6) 3.3 0.0033 P8 Cb GC ACAAGACACA (5) 1.6 0.0016 P8 Cb GC GCTCTGGAGA (8) 1.6 0.0016 P8 Cb GC TCCCTTCAGA (11) 1.6 0.0016 P8 Cb GC TGGGGTTGGC (6) 1.6 0.0016 Cb medulloblastoma TTTTTATTTT (14) 4.6 0.0046 Cb medulloblastoma ACAAGACACA (5) 2.3 0.0023 Cb medulloblastoma GGGCGGGAAG (4) 2.3 0.0023 Cb medulloblastoma TTGCATTGCT (5) 2.3 0.0023 Cb medulloblastoma TTGGGTTTTT (9) 2.3 0.0023 P8 GC+1d culture TTTTTATTTT (14) 9.1 0.0091 P8 GC+1d culture TTGCATTGCT (5) 8 0.008 P8 GC+1d culture GTTCCTAGGA (6) 4.6 0.0046 P8 GC+1d culture TTGGGTTTTT (9) 4.6 0.0046 P8 GC+1d culture GGGCGGGAAG (4) 3.4 0.0034 P8 GC+1d culture CTATGTGGGC (5) 1.1 0.0011 P8 GC+1d culture GAAATCTGTG (7) 1.1 0.0011 P8 GC+SHH+1d culture TTGCATTGCT (5) 16.4 0.0164 P8 GC+SHH+1d culture TTTTTATTTT (14) 10.5 0.0105 P8 GC+SHH+1d culture CTATGTGGGC (5) 3.5 0.0035 P8 GC+SHH+1d culture GTTCCTAGGA (6) 3.5 0.0035 P8 GC+SHH+1d culture TTGGGTTTTT (9) 3.5 0.0035 P8 GC+SHH+1d culture GAAATCTGTG (7) 2.3 0.0023 P8 GC+SHH+1d culture GGGCGGGAAG (4) 2.3 0.0023 P8 GC+SHH+1d culture TCCTCCCCTC (6) 1.2 0.0012 P8 GC+SHH+1d culture TTGCAGTGCC (4) 1.2 0.0012 3T3 fibroblasts CTATGTGGGC (5) 7 0.007 3T3 fibroblasts TCCCTTCAGA (11) 3.5 0.0035 3T3 fibroblasts TTGGGTTTTT (9) 3.5 0.0035 E15 cortex GCTCTGGAGA (8) 4.9 0.0049 E15 cortex TGGGGTTGGC (6) 4.9 0.0049 E15 cortex TTGCATTGCT (5) 4.9 0.0049 E15 cortex TTGGGTTTTT (9) 4.9 0.0049 P1 cortex GAAAAAGGAA (9) 9.1 0.0091 P1 cortex GCTTTTAAAA (11) 9.1 0.0091 P1 cortex TTGCATTGCT (5) 9.1 0.0091 P1 cortex GGAATAAACA (4) 4.5 0.0045 P1 cortex TTGGGTTTTT (9) 4.5 0.0045 Hypothalamus ACAAGACACA (5) 10.9 0.0109 Hypothalamus TTGCATTGCT (5) 5.4 0.0054 Hypothalamus TTTTTATTTT (14) 5.4 0.0054 Hypothalamus CTATGTGGGC (5) 1.8 0.0018 Hypothalamus GTTCCTAGGA (6) 1.8 0.0018 E12.5 retina TTGGGTTTTT (9) 3.8 0.0038 E12.5 retina TCCTCCCCTC (6) 1.9 0.0019 E12.5 retina TTCTCAATTA (6) 1.9 0.0019 E12.5 retina TTGCATTGCT (5) 1.9 0.0019 E12.5 retina TTTTTATTTT (14) 1.9 0.0019 E14.5 retina CTATGTGGGC (5) 9.1 0.0091 E14.5 retina TTGGGTTTTT (9) 7.3 0.0073 E14.5 retina TTGCAGTGCC (4) 3.6 0.0036 E14.5 retina ACAAGACACA (5) 1.8 0.0018 E14.5 retina GGAATAAACA (4) 1.8 0.0018 E14.5 retina GTTCCTAGGA (6) 1.8 0.0018 E14.5 retina TCCTCCCCTC (6) 1.8 0.0018 E14.5 retina TGGGGTTTGG (3) 1.8 0.0018 E14.5 retina TTTTTATTTT (14) 1.8 0.0018 E16.5 retina CTATGTGGGC (5) 14.5 0.0145 E16.5 retina TTGCAGTGCC (4) 7.2 0.0072 E16.5 retina TTGGGTTTTT (9) 5.4 0.0054 E16.5 retina GCTTTTAAAA (11) 3.6 0.0036 E16.5 retina TTTTTATTTT (14) 3.6 0.0036 E16.5 retina ACAAGACACA (5) 1.8 0.0018 E16.5 retina GGGCGGGAAG (4) 1.8 0.0018 E16.5 retina TTGCATTGCT (5) 1.8 0.0018 E18.5 retina ACAAGACACA (5) 10.9 0.0109 E18.5 retina CTATGTGGGC (5) 7.3 0.0073 E18.5 retina TTGGGTTTTT (9) 5.5 0.0055 E18.5 retina TTTTTATTTT (14) 3.6 0.0036 E18.5 retina GCTTTTAAAA (11) 1.8 0.0018 E18.5 retina GGAAGGAGTG (8) 1.8 0.0018 E18.5 retina TTCTCAATTA (6) 1.8 0.0018 E18.5 retina TTGCAGTGCC (4) 1.8 0.0018 P0.5 retina GTTCCTAGGA (6) 3.9 0.0039 P0.5 retina TTGCAGTGCC (4) 3.9 0.0039 P0.5 retina CTATGTGGGC (5) 2 0.002 P0.5 retina TCCTCCCCTC (6) 2 0.002 P0.5 retina TGGGGTTTGG (3) 2 0.002 P0.5 retina TTGCATTGCT (5) 2 0.002 P0.5 retina TTTTTATTTT (14) 2 0.002 P2.5 retina TTGCATTGCT (5) 7 0.007 P2.5 retina TTTTTATTTT (14) 5.3 0.0053 P2.5 retina TTGGGTTTTT (9) 3.5 0.0035 P2.5 retina ACAAGACACA (5) 1.8 0.0018 P2.5 retina CTATGTGGGC (5) 1.8 0.0018 P2.5 retina GCTTTTAAAA (11) 1.8 0.0018 P2.5 retina GGGCGGGAAG (4) 1.8 0.0018 P2.5 retina TGGGGTTGGC (6) 1.8 0.0018 P2.5 retina TTCTCAATTA (6) 1.8 0.0018 P4.5 retina TTGGGTTTTT (9) 7.9 0.0079 P4.5 retina TTTTTATTTT (14) 4 0.004 P4.5 retina GGAAGGAGTG (8) 2 0.002 P4.5 retina GGAATAAACA (4) 2 0.002 P4.5 retina TTGCATTGCT (5) 2 0.002 P6.5 retina TTGGGTTTTT (9) 5 0.005 P6.5 retina TTTTTATTTT (14) 5 0.005 P6.5 retina ACAAGACACA (5) 3.3 0.0033 P6.5 retina GTTCCTAGGA (6) 3.3 0.0033 P6.5 retina GCTCTGGAGA (8) 1.7 0.0017 P6.5 retina TGGGGTTTGG (3) 1.7 0.0017 P6.5 retina TTGCATTGCT (5) 1.7 0.0017 P10.5 crx- retina TTGGGTTTTT (9) 9.3 0.0093 P10.5 crx- retina TTGCATTGCT (5) 7.4 0.0074 P10.5 crx- retina TGGGGTTGGC (6) 3.7 0.0037 P10.5 crx- retina TTTTTATTTT (14) 3.7 0.0037 P10.5 crx- retina ACAAGACACA (5) 1.9 0.0019 P10.5 crx- retina GGAAGGAGTG (8) 1.9 0.0019 P10.5 crx- retina GTTCCTAGGA (6) 1.9 0.0019 P10.5 crx- retina TCCTCCCCTC (6) 1.9 0.0019 P10.5 crx+ retina TTTTTATTTT (14) 5.8 0.0058 P10.5 crx+ retina ACAAGACACA (5) 3.8 0.0038 P10.5 crx+ retina GCTTTTAAAA (11) 1.9 0.0019 P10.5 crx+ retina GGGCGGGAAG (4) 1.9 0.0019 P10.5 crx+ retina TTGCATTGCT (5) 1.9 0.0019 P10.5 crx+ retina TTGGGTTTTT (9) 1.9 0.0019 Adult retinal GTTCCTAGGA (6) 3.7 0.0037 Adult retinal TTGGGTTTTT (9) 3.7 0.0037 Adult retinal TTTTTATTTT (14) 3.7 0.0037 Adult retinal TGGGGTTGGC (6) 1.9 0.0019 Adult retinal TTGCAGTGCC (4) 1.9 0.0019 ONL ACAAGACACA (5) 1.9 0.0019 ONL GGAAGGAGTG (8) 1.9 0.0019 ONL GTTCCTAGGA (6) 1.9 0.0019 ONL TTGGGTTTTT (9) 1.9 0.0019 ONL TTTTTATTTT (14) 1.9 0.0019