Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.45602
Brd8
bromodomain containing 8
18
78656
Mm.45602
4432404P07Rik
RIKEN cDNA 4432404P07 gene
18
70787
Gene Ontology
receptor activity
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 94 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATAACTGAGT
(
5
)
32.6
0.0326
P8 Cb GC
GGTTTTGTTA
(
3
)
6.5
0.0065
P8 Cb GC
GAAGATGAAG (
10
)
4.9
0.0049
P8 Cb GC
GGCTCTGTTA
(
4
)
4.9
0.0049
P8 Cb GC
CAGACTGTGG
(
4
)
1.6
0.0016
P8 Cb GC
TAGGCCAAAC
(
3
)
1.6
0.0016
P8 Cb GC
TATGTGTGCA
(
7
)
1.6
0.0016
Cb medulloblastoma
ATAACTGAGT
(
5
)
23.1
0.0231
Cb medulloblastoma
GCGGCGCAGC (
9
)
4.6
0.0046
Cb medulloblastoma
GGCTCTGTTA
(
4
)
4.6
0.0046
Cb medulloblastoma
TATGTGTGCA
(
7
)
2.3
0.0023
P8 GC+1d culture
ATAACTGAGT
(
5
)
18.3
0.0183
P8 GC+1d culture
GGCTCTGTTA
(
4
)
4.6
0.0046
P8 GC+1d culture
GCGGCGCAGC (
9
)
3.4
0.0034
P8 GC+1d culture
TGGAATTCTT (
6
)
2.3
0.0023
P8 GC+1d culture
GGTTTTGTTA
(
3
)
1.1
0.0011
P8 GC+1d culture
TAGGCCAAAC
(
3
)
1.1
0.0011
P8 GC+1d culture
TGTGCTCCCA
(
9
)
1.1
0.0011
P8 GC+SHH+1d culture
ATAACTGAGT
(
5
)
21.1
0.0211
P8 GC+SHH+1d culture
GGCTCTGTTA
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
GCGGCGCAGC (
9
)
2.3
0.0023
P8 GC+SHH+1d culture
GGTTTTGTTA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TGGAATTCTT (
6
)
1.2
0.0012
3T3 fibroblasts
GCGGCGCAGC (
9
)
3.5
0.0035
E15 cortex
ATAACTGAGT
(
5
)
14.8
0.0148
E15 cortex
GGCTCTGTTA
(
4
)
9.9
0.0099
E15 cortex
GGTTTTGTTA
(
3
)
4.9
0.0049
P1 cortex
ATAACTGAGT
(
5
)
9.1
0.0091
P1 cortex
GGTTTTGTTA
(
3
)
4.5
0.0045
P1 cortex
TATGTGTGCA
(
7
)
4.5
0.0045
Hypothalamus
ATAACTGAGT
(
5
)
7.2
0.0072
Hypothalamus
TATGTGTGCA
(
7
)
3.6
0.0036
Hypothalamus
CAGACTGTGG
(
4
)
1.8
0.0018
Hypothalamus
GGCTCTGTTA
(
4
)
1.8
0.0018
Hypothalamus
TAGGCCAAAC
(
3
)
1.8
0.0018
Hypothalamus
TGTGCTCCCA
(
9
)
1.8
0.0018
E12.5 retina
ATAACTGAGT
(
5
)
13.1
0.0131
E12.5 retina
GGCTCTGTTA
(
4
)
11.3
0.0113
E12.5 retina
GGTTTTGTTA
(
3
)
3.8
0.0038
E12.5 retina
TATGTGTGCA
(
7
)
3.8
0.0038
E12.5 retina
TAGGCCAAAC
(
3
)
1.9
0.0019
E12.5 retina
TGTGCTCCCA
(
9
)
1.9
0.0019
E14.5 retina
ATAACTGAGT
(
5
)
18.2
0.0182
E14.5 retina
GGCTCTGTTA
(
4
)
3.6
0.0036
E14.5 retina
GCGGCGCAGC (
9
)
1.8
0.0018
E14.5 retina
TATGTGTGCA
(
7
)
1.8
0.0018
E16.5 retina
ATAACTGAGT
(
5
)
16.3
0.0163
E16.5 retina
GGCTCTGTTA
(
4
)
9.1
0.0091
E16.5 retina
TGTTCTTCCT (
7
)
3.6
0.0036
E16.5 retina
TATGTGTGCA
(
7
)
1.8
0.0018
E16.5 retina
TCATTTGGCC
(
4
)
1.8
0.0018
E18.5 retina
ATAACTGAGT
(
5
)
9.1
0.0091
E18.5 retina
GGCTCTGTTA
(
4
)
1.8
0.0018
E18.5 retina
TAGGCCAAAC
(
3
)
1.8
0.0018
E18.5 retina
TATGTGTGCA
(
7
)
1.8
0.0018
P0.5 retina
ATAACTGAGT
(
5
)
11.8
0.0118
P0.5 retina
GGCTCTGTTA
(
4
)
3.9
0.0039
P0.5 retina
GGTTTTGTTA
(
3
)
3.9
0.0039
P0.5 retina
TATGTGTGCA
(
7
)
3.9
0.0039
P0.5 retina
TAGGCCAAAC
(
3
)
2
0.002
P0.5 retina
TGGAATTCTT (
6
)
2
0.002
P2.5 retina
ATAACTGAGT
(
5
)
21.1
0.0211
P2.5 retina
TAGGCCAAAC
(
3
)
5.3
0.0053
P2.5 retina
GGCTCTGTTA
(
4
)
3.5
0.0035
P2.5 retina
TATGTGTGCA
(
7
)
3.5
0.0035
P2.5 retina
GCGGCGCAGC (
9
)
1.8
0.0018
P2.5 retina
GGTTTTGTTA
(
3
)
1.8
0.0018
P2.5 retina
TGGAATTCTT (
6
)
1.8
0.0018
P4.5 retina
ATAACTGAGT
(
5
)
15.9
0.0159
P4.5 retina
GGCTCTGTTA
(
4
)
5.9
0.0059
P4.5 retina
TCATTTGGCC
(
4
)
4
0.004
P4.5 retina
TATGTGTGCA
(
7
)
2
0.002
P6.5 retina
ATAACTGAGT
(
5
)
13.3
0.0133
P6.5 retina
GGCTCTGTTA
(
4
)
8.3
0.0083
P6.5 retina
GCGGCGCAGC (
9
)
1.7
0.0017
P10.5 crx- retina
ATAACTGAGT
(
5
)
9.3
0.0093
P10.5 crx- retina
GGTTTTGTTA
(
3
)
7.4
0.0074
P10.5 crx- retina
GGCTCTGTTA
(
4
)
5.6
0.0056
P10.5 crx- retina
GCGGCGCAGC (
9
)
3.7
0.0037
P10.5 crx- retina
CAGACTGTGG
(
4
)
1.9
0.0019
P10.5 crx- retina
TATGTGTGCA
(
7
)
1.9
0.0019
P10.5 crx- retina
TGTTCTTCCT (
7
)
1.9
0.0019
P10.5 crx+ retina
ATAACTGAGT
(
5
)
13.5
0.0135
P10.5 crx+ retina
GGCTCTGTTA
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGTTTTGTTA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TAGGCCAAAC
(
3
)
1.9
0.0019
P10.5 crx+ retina
TATGTGTGCA
(
7
)
1.9
0.0019
P10.5 crx+ retina
TGTGCTCCCA
(
9
)
1.9
0.0019
Adult retinal
ATAACTGAGT
(
5
)
7.4
0.0074
Adult retinal
TATGTGTGCA
(
7
)
1.9
0.0019
ONL
ATAACTGAGT
(
5
)
3.8
0.0038
ONL
GGCTCTGTTA
(
4
)
1.9
0.0019
ONL
GGTTTTGTTA
(
3
)
1.9
0.0019
ONL
TAGGCCAAAC
(
3
)
1.9
0.0019
