Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.159684	Tmpo	thymopoietin	10	10 C2 (10 49.0 cM)	21917
Mm.159684	5830485P09Rik	RIKEN cDNA 5830485P09 gene	10		76121
Mm.159684	AW547477	expressed sequence AW547477	10		103472
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGATGTAAT (3) 17.9 0.0179 P8 Cb GC TTTTGCCTTA (3) 9.8 0.0098 P8 Cb GC CCATTTTTTA (5) 8.2 0.0082 P8 Cb GC TACCTGTGAA (4) 8.2 0.0082 P8 Cb GC TATGGCTTAG (3) 4.9 0.0049 P8 Cb GC GAAGTCCTAC (3) 1.6 0.0016 P8 Cb GC TGGATAAAAA (4) 1.6 0.0016 Cb medulloblastoma CCATTTTTTA (5) 6.9 0.0069 Cb medulloblastoma TGGATAAAAA (4) 4.6 0.0046 Cb medulloblastoma TACCTGTGAA (4) 2.3 0.0023 P8 GC+1d culture GTGATGTAAT (3) 8 0.008 P8 GC+1d culture CCATTTTTTA (5) 5.7 0.0057 P8 GC+1d culture TACCTGTGAA (4) 3.4 0.0034 P8 GC+1d culture TATGGCTTAG (3) 2.3 0.0023 P8 GC+SHH+1d culture GTGATGTAAT (3) 22.2 0.0222 P8 GC+SHH+1d culture CCATTTTTTA (5) 5.9 0.0059 P8 GC+SHH+1d culture TACCTGTGAA (4) 5.9 0.0059 P8 GC+SHH+1d culture GAAGTCCTAC (3) 2.3 0.0023 P8 GC+SHH+1d culture TATGGCTTAG (3) 2.3 0.0023 P8 GC+SHH+1d culture TTTTGCCTTA (3) 2.3 0.0023 P8 GC+SHH+1d culture TGGATAAAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TGGCTCATCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTTACCTGG (3) 1.2 0.0012 3T3 fibroblasts CCATTTTTTA (5) 3.5 0.0035 3T3 fibroblasts GACACCGAGA (3) 3.5 0.0035 E15 cortex GTGATGTAAT (3) 9.9 0.0099 Hypothalamus GTGATGTAAT (3) 1.8 0.0018 Hypothalamus TGGCTCATCT (4) 1.8 0.0018 E12.5 retina GTGATGTAAT (3) 24.4 0.0244 E12.5 retina TACCTGTGAA (4) 11.3 0.0113 E12.5 retina CCATTTTTTA (5) 3.8 0.0038 E12.5 retina GAAGTCCTAC (3) 3.8 0.0038 E12.5 retina TATGGCTTAG (3) 3.8 0.0038 E12.5 retina TTTTACCTGG (3) 3.8 0.0038 E12.5 retina TTTTGCCTTA (3) 3.8 0.0038 E12.5 retina TAGAAAATAA (3) 1.9 0.0019 E14.5 retina GTGATGTAAT (3) 16.4 0.0164 E14.5 retina CCATTTTTTA (5) 7.3 0.0073 E14.5 retina TACCTGTGAA (4) 3.6 0.0036 E14.5 retina TTTTACCTGG (3) 3.6 0.0036 E14.5 retina TTTTGCCTTA (3) 1.8 0.0018 E16.5 retina GTGATGTAAT (3) 16.3 0.0163 E16.5 retina CCATTTTTTA (5) 3.6 0.0036 E16.5 retina GACACCGAGA (3) 3.6 0.0036 E16.5 retina TTTTGCCTTA (3) 3.6 0.0036 E16.5 retina TACCTGTGAA (4) 1.8 0.0018 E16.5 retina TAGAAAATAA (3) 1.8 0.0018 E16.5 retina TTCTGGTCTC (3) 1.8 0.0018 E18.5 retina GTGATGTAAT (3) 36.4 0.0364 E18.5 retina CCATTTTTTA (5) 3.6 0.0036 E18.5 retina TACCTGTGAA (4) 1.8 0.0018 E18.5 retina TAGAAAATAA (3) 1.8 0.0018 E18.5 retina TATGGCTTAG (3) 1.8 0.0018 E18.5 retina TGGATAAAAA (4) 1.8 0.0018 E18.5 retina TTTTACCTGG (3) 1.8 0.0018 E18.5 retina TTTTGCCTTA (3) 1.8 0.0018 P0.5 retina GTGATGTAAT (3) 33.4 0.0334 P0.5 retina TACCTGTGAA (4) 7.9 0.0079 P0.5 retina CCATTTTTTA (5) 5.9 0.0059 P0.5 retina TTCTGGTCTC (3) 3.9 0.0039 P0.5 retina TTTTGCCTTA (3) 3.9 0.0039 P0.5 retina TTTTACCTGG (3) 2 0.002 P2.5 retina GTGATGTAAT (3) 19.4 0.0194 P2.5 retina TACCTGTGAA (4) 10.6 0.0106 P2.5 retina CCATTTTTTA (5) 5.3 0.0053 P2.5 retina GAAGTCCTAC (3) 1.8 0.0018 P2.5 retina TTTTACCTGG (3) 1.8 0.0018 P4.5 retina GTGATGTAAT (3) 17.8 0.0178 P4.5 retina TATGGCTTAG (3) 4 0.004 P4.5 retina CCATTTTTTA (5) 2 0.002 P4.5 retina TACCTGTGAA (4) 2 0.002 P4.5 retina TGGCTCATCT (4) 2 0.002 P6.5 retina GTGATGTAAT (3) 6.7 0.0067 P6.5 retina CCATTTTTTA (5) 3.3 0.0033 P6.5 retina TACCTGTGAA (4) 1.7 0.0017 P10.5 crx- retina GTGATGTAAT (3) 5.6 0.0056 P10.5 crx- retina TATGGTTAGA (3) 3.7 0.0037 P10.5 crx+ retina TACCTGTGAA (4) 5.8 0.0058 P10.5 crx+ retina GTGATGTAAT (3) 3.8 0.0038 P10.5 crx+ retina TATGGTTAGA (3) 1.9 0.0019 Adult retinal CCATTTTTTA (5) 1.9 0.0019 Adult retinal TACCTGTGAA (4) 1.9 0.0019 ONL GTGATGTAAT (3) 5.7 0.0057 ONL TATGGTTAGA (3) 1.9 0.0019