Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.240490	1200009K13Rik	RIKEN cDNA 1200009K13 gene	6		66870
Mm.240490	9330147J08Rik	RIKEN cDNA 9330147J08 gene	6		320467
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 165 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATACTTTTG (3) 31 0.031 P8 Cb GC CTTAAGGATC (3) 24.5 0.0245 P8 Cb GC CTCATTTCCT (2) 4.9 0.0049 P8 Cb GC TAAGCCACCA (2) 4.9 0.0049 P8 Cb GC AAGAATGCAT (2) 3.3 0.0033 P8 Cb GC AGCCTCTTCA (2) 3.3 0.0033 P8 Cb GC TGTGAAAATG (2) 3.3 0.0033 P8 Cb GC CAAAAGCTTT (2) 1.6 0.0016 P8 Cb GC CTGAAGATTC (3) 1.6 0.0016 P8 Cb GC CTTCAGGCCA (2) 1.6 0.0016 P8 Cb GC TAAACTTCTG (2) 1.6 0.0016 P8 Cb GC TTCAGATCCC (3) 1.6 0.0016 Cb medulloblastoma CTTAAGGATC (3) 6.9 0.0069 Cb medulloblastoma AATACTTTTG (3) 4.6 0.0046 Cb medulloblastoma CTCATTTCCT (2) 4.6 0.0046 Cb medulloblastoma AGTGCTGGGA (2) 2.3 0.0023 Cb medulloblastoma CAAAAGCTTT (2) 2.3 0.0023 Cb medulloblastoma CCTGGGCACC (3) 2.3 0.0023 Cb medulloblastoma TAAACTTCTG (2) 2.3 0.0023 Cb medulloblastoma TAAGCCACCA (2) 2.3 0.0023 Cb medulloblastoma TGTCCAGGAC (3) 2.3 0.0023 P8 GC+1d culture CTTAAGGATC (3) 11.4 0.0114 P8 GC+1d culture AATACTTTTG (3) 9.1 0.0091 P8 GC+1d culture CCTGGGCACC (3) 3.4 0.0034 P8 GC+1d culture AAAATAAATT (3) 2.3 0.0023 P8 GC+1d culture CAAAAGCTTT (2) 2.3 0.0023 P8 GC+1d culture AAGAATGCAT (2) 1.1 0.0011 P8 GC+1d culture CTGAAGATTC (3) 1.1 0.0011 P8 GC+1d culture TAAACTTCTG (2) 1.1 0.0011 P8 GC+1d culture TGTCCAGGAC (3) 1.1 0.0011 P8 GC+SHH+1d culture CTTAAGGATC (3) 16.4 0.0164 P8 GC+SHH+1d culture AATACTTTTG (3) 9.4 0.0094 P8 GC+SHH+1d culture CCTGGGCACC (3) 4.7 0.0047 P8 GC+SHH+1d culture TAAGCCACCA (2) 3.5 0.0035 P8 GC+SHH+1d culture CAAAAGCTTT (2) 2.3 0.0023 P8 GC+SHH+1d culture TGTCCAGGAC (3) 2.3 0.0023 P8 GC+SHH+1d culture AAAATAAATT (3) 1.2 0.0012 P8 GC+SHH+1d culture AGCGACAAAC (2) 1.2 0.0012 P8 GC+SHH+1d culture CTCATTTCCT (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGAAGATTC (3) 1.2 0.0012 P8 GC+SHH+1d culture CTTCAGGCCA (2) 1.2 0.0012 P8 GC+SHH+1d culture TAAACTTCTG (2) 1.2 0.0012 3T3 fibroblasts CCTGGGCACC (3) 17.5 0.0175 3T3 fibroblasts AGCCTCTTCA (2) 3.5 0.0035 3T3 fibroblasts CTTAAGGATC (3) 3.5 0.0035 3T3 fibroblasts CTTCAGGCCA (2) 3.5 0.0035 E15 cortex CCTGGGCACC (3) 14.8 0.0148 E15 cortex CTTAAGGATC (3) 9.9 0.0099 E15 cortex CTCATTTCCT (2) 4.9 0.0049 E15 cortex CTGAAGATTC (3) 4.9 0.0049 P1 cortex CTGAAGATTC (3) 18.2 0.0182 P1 cortex AATACTTTTG (3) 9.1 0.0091 P1 cortex CTTAAGGATC (3) 9.1 0.0091 P1 cortex CTCATTTCCT (2) 4.5 0.0045 Hypothalamus CTTAAGGATC (3) 12.7 0.0127 Hypothalamus TGCTAGGAAT (2) 5.4 0.0054 Hypothalamus AATACTTTTG (3) 3.6 0.0036 Hypothalamus AAAATAAATT (3) 1.8 0.0018 Hypothalamus CCTGGGCACC (3) 1.8 0.0018 Hypothalamus CTTCAGGCCA (2) 1.8 0.0018 Hypothalamus CTTTGTAATC (2) 1.8 0.0018 E12.5 retina CTTAAGGATC (3) 37.5 0.0375 E12.5 retina AATACTTTTG (3) 18.8 0.0188 E12.5 retina CCTGGGCACC (3) 5.6 0.0056 E12.5 retina AAGAATGCAT (2) 3.8 0.0038 E12.5 retina CTTTGTAATC (2) 3.8 0.0038 E12.5 retina TAAACTTCTG (2) 3.8 0.0038 E12.5 retina AGCGACAAAC (2) 1.9 0.0019 E12.5 retina CAAAAGCTTT (2) 1.9 0.0019 E12.5 retina TAAGCCACCA (2) 1.9 0.0019 E12.5 retina TTAACTAAAG (2) 1.9 0.0019 E14.5 retina AATACTTTTG (3) 27.3 0.0273 E14.5 retina CTTAAGGATC (3) 20 0.02 E14.5 retina CAAAAGCTTT (2) 5.5 0.0055 E14.5 retina AGCCTCTTCA (2) 3.6 0.0036 E14.5 retina CTTCAGGCCA (2) 3.6 0.0036 E14.5 retina TTAACTAAAG (2) 3.6 0.0036 E14.5 retina AAGAATGCAT (2) 1.8 0.0018 E14.5 retina AGCGACAAAC (2) 1.8 0.0018 E14.5 retina AGTGCTGGGA (2) 1.8 0.0018 E14.5 retina CCTGGGCACC (3) 1.8 0.0018 E14.5 retina CTCATTTCCT (2) 1.8 0.0018 E14.5 retina TAAACTTCTG (2) 1.8 0.0018 E14.5 retina TAAGCCACCA (2) 1.8 0.0018 E16.5 retina CTTAAGGATC (3) 29 0.029 E16.5 retina AATACTTTTG (3) 18.1 0.0181 E16.5 retina CAAAAGCTTT (2) 12.7 0.0127 E16.5 retina CCTGGGCACC (3) 9.1 0.0091 E16.5 retina CTGAAGATTC (3) 9.1 0.0091 E16.5 retina AGCCTCTTCA (2) 5.4 0.0054 E16.5 retina AAAATAAATT (3) 3.6 0.0036 E16.5 retina CTCATTTCCT (2) 3.6 0.0036 E16.5 retina CTTCAGGCCA (2) 3.6 0.0036 E16.5 retina TAAACTTCTG (2) 1.8 0.0018 E16.5 retina TAAGCCACCA (2) 1.8 0.0018 E18.5 retina CTTAAGGATC (3) 32.7 0.0327 E18.5 retina AATACTTTTG (3) 14.6 0.0146 E18.5 retina CAAAAGCTTT (2) 3.6 0.0036 E18.5 retina CCTGGGCACC (3) 3.6 0.0036 E18.5 retina CTCATTTCCT (2) 3.6 0.0036 E18.5 retina TAAGCCACCA (2) 3.6 0.0036 E18.5 retina AGCCTCTTCA (2) 1.8 0.0018 E18.5 retina TGTCCAGGAC (3) 1.8 0.0018 P0.5 retina CTTAAGGATC (3) 19.6 0.0196 P0.5 retina AATACTTTTG (3) 13.7 0.0137 P0.5 retina CAAAAGCTTT (2) 3.9 0.0039 P0.5 retina AAAATAAATT (3) 2 0.002 P0.5 retina AAGACAAACG (2) 2 0.002 P0.5 retina AGCGACAAAC (2) 2 0.002 P0.5 retina CCTGGGCACC (3) 2 0.002 P0.5 retina TAAGCCACCA (2) 2 0.002 P0.5 retina TTCAGATCCC (3) 2 0.002 P2.5 retina CTTAAGGATC (3) 17.6 0.0176 P2.5 retina AATACTTTTG (3) 7 0.007 P2.5 retina CCTGGGCACC (3) 7 0.007 P2.5 retina CTTCAGGCCA (2) 3.5 0.0035 P2.5 retina TGTCCAGGAC (3) 3.5 0.0035 P2.5 retina AGCCTCTTCA (2) 1.8 0.0018 P2.5 retina CAAAAGCTTT (2) 1.8 0.0018 P2.5 retina CTCATTTCCT (2) 1.8 0.0018 P4.5 retina AATACTTTTG (3) 11.9 0.0119 P4.5 retina CTTAAGGATC (3) 11.9 0.0119 P4.5 retina CCTGGGCACC (3) 9.9 0.0099 P4.5 retina AAGAATGCAT (2) 2 0.002 P4.5 retina CTGAAGATTC (3) 2 0.002 P4.5 retina TGTGAAAATG (2) 2 0.002 P6.5 retina CTTAAGGATC (3) 11.7 0.0117 P6.5 retina AATACTTTTG (3) 8.3 0.0083 P6.5 retina CAAAAGCTTT (2) 8.3 0.0083 P6.5 retina CCTGGGCACC (3) 3.3 0.0033 P6.5 retina AAGACAAACG (2) 1.7 0.0017 P6.5 retina AGCCTCTTCA (2) 1.7 0.0017 P6.5 retina CTCATTTCCT (2) 1.7 0.0017 P6.5 retina CTGAAGATTC (3) 1.7 0.0017 P6.5 retina TAAGCCACCA (2) 1.7 0.0017 P6.5 retina TGTGAAAATG (2) 1.7 0.0017 P10.5 crx- retina AATACTTTTG (3) 9.3 0.0093 P10.5 crx- retina CTCATTTCCT (2) 5.6 0.0056 P10.5 crx- retina CTTAAGGATC (3) 5.6 0.0056 P10.5 crx- retina TTAACTAAAG (2) 3.7 0.0037 P10.5 crx- retina AAGACAAACG (2) 1.9 0.0019 P10.5 crx- retina CAAAAGCTTT (2) 1.9 0.0019 P10.5 crx- retina CCTGGGCACC (3) 1.9 0.0019 P10.5 crx- retina CTTCAGGCCA (2) 1.9 0.0019 P10.5 crx- retina CTTTGTAATC (2) 1.9 0.0019 P10.5 crx- retina TAAACTTCTG (2) 1.9 0.0019 P10.5 crx- retina TAAGCCACCA (2) 1.9 0.0019 P10.5 crx+ retina CTTAAGGATC (3) 13.5 0.0135 P10.5 crx+ retina AATACTTTTG (3) 5.8 0.0058 P10.5 crx+ retina AAGAATGCAT (2) 1.9 0.0019 P10.5 crx+ retina AAGACAAACG (2) 1.9 0.0019 P10.5 crx+ retina CTTTGTAATC (2) 1.9 0.0019 P10.5 crx+ retina TAAGCCACCA (2) 1.9 0.0019 Adult retinal CTTAAGGATC (3) 7.4 0.0074 Adult retinal CCTGGGCACC (3) 3.7 0.0037 Adult retinal TTCAGATCCC (3) 3.7 0.0037 Adult retinal AATACTTTTG (3) 1.9 0.0019 Adult retinal AGTGCTGGGA (2) 1.9 0.0019 Adult retinal CTCATTTCCT (2) 1.9 0.0019 Adult retinal CTGAAGATTC (3) 1.9 0.0019 Adult retinal CTTTGTAATC (2) 1.9 0.0019 ONL AATACTTTTG (3) 3.8 0.0038 ONL CTTAAGGATC (3) 3.8 0.0038 ONL TGTGAAAATG (2) 1.9 0.0019 ONL TTAACTAAAG (2) 1.9 0.0019