Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.246863
Prpf31
PRP31 pre-mRNA processing factor 31 homolog (yeast)
7
68988
Human Homolog
PRPF31[PRP31 pre-mRNA processing factor 31 homolog (yeast)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAAGATGCT
(
2
)
65.3
0.0653
P8 Cb GC
CTGCTGCTTC
(
2
)
4.9
0.0049
P8 Cb GC
CATATTGTAC
1.6
0.0016
Cb medulloblastoma
GGAAGATGCT
(
2
)
97.1
0.0971
Cb medulloblastoma
GACCCAGCTC
(
3
)
4.6
0.0046
P8 GC+1d culture
GGAAGATGCT
(
2
)
50.2
0.0502
P8 GC+1d culture
CTGCTGCTTC
(
2
)
3.4
0.0034
P8 GC+1d culture
CATATTGTAC
1.1
0.0011
P8 GC+SHH+1d culture
GGAAGATGCT
(
2
)
71.4
0.0714
P8 GC+SHH+1d culture
CTGCTGCTTC
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
CATATTGTAC
1.2
0.0012
P8 GC+SHH+1d culture
GACCCAGCTC
(
3
)
1.2
0.0012
3T3 fibroblasts
CTGCTGCTTC
(
2
)
14
0.014
3T3 fibroblasts
GACCCAGCTC
(
3
)
3.5
0.0035
3T3 fibroblasts
GGAACCTTGG
3.5
0.0035
E15 cortex
GGAAGATGCT
(
2
)
9.9
0.0099
E15 cortex
GACCCAGCTC
(
3
)
4.9
0.0049
P1 cortex
GGAAGATGCT
(
2
)
36.4
0.0364
P1 cortex
CTGCTGCTTC
(
2
)
4.5
0.0045
Hypothalamus
GGAAGATGCT
(
2
)
123.2
0.1232
Hypothalamus
GACCCAGCTC
(
3
)
3.6
0.0036
Hypothalamus
CATATTGTAC
1.8
0.0018
E12.5 retina
GGAAGATGCT
(
2
)
39.4
0.0394
E12.5 retina
CTGCTGCTTC
(
2
)
11.3
0.0113
E12.5 retina
GGAACCTTGG
3.8
0.0038
E12.5 retina
GACCCAGCTC
(
3
)
1.9
0.0019
E14.5 retina
GGAAGATGCT
(
2
)
32.8
0.0328
E14.5 retina
CTGCTGCTTC
(
2
)
3.6
0.0036
E14.5 retina
CATATTGTAC
1.8
0.0018
E14.5 retina
GGAACCTTGG
1.8
0.0018
E16.5 retina
GGAAGATGCT
(
2
)
18.1
0.0181
E16.5 retina
CTGCTGCTTC
(
2
)
3.6
0.0036
E16.5 retina
CATATTGTAC
1.8
0.0018
E16.5 retina
GGAACCTTGG
1.8
0.0018
E18.5 retina
GGAAGATGCT
(
2
)
85.5
0.0855
E18.5 retina
CTGCTGCTTC
(
2
)
12.7
0.0127
E18.5 retina
GACCCAGCTC
(
3
)
3.6
0.0036
E18.5 retina
CATATTGTAC
1.8
0.0018
E18.5 retina
GGAACCTTGG
1.8
0.0018
P0.5 retina
GGAAGATGCT
(
2
)
45.1
0.0451
P0.5 retina
CTGCTGCTTC
(
2
)
9.8
0.0098
P0.5 retina
GACCCAGCTC
(
3
)
5.9
0.0059
P2.5 retina
GGAAGATGCT
(
2
)
38.7
0.0387
P2.5 retina
CTGCTGCTTC
(
2
)
10.6
0.0106
P2.5 retina
GACCCAGCTC
(
3
)
3.5
0.0035
P2.5 retina
GGAACCTTGG
1.8
0.0018
P4.5 retina
GGAAGATGCT
(
2
)
71.3
0.0713
P4.5 retina
CTGCTGCTTC
(
2
)
4
0.004
P4.5 retina
GGAACCTTGG
2
0.002
P6.5 retina
GGAAGATGCT
(
2
)
36.7
0.0367
P6.5 retina
CTGCTGCTTC
(
2
)
10
0.01
P6.5 retina
GGAACCTTGG
3.3
0.0033
P6.5 retina
CATATTGTAC
1.7
0.0017
P10.5 crx- retina
GGAAGATGCT
(
2
)
37.2
0.0372
P10.5 crx- retina
CTGCTGCTTC
(
2
)
3.7
0.0037
P10.5 crx- retina
GACCCAGCTC
(
3
)
1.9
0.0019
P10.5 crx+ retina
GGAAGATGCT
(
2
)
65.4
0.0654
P10.5 crx+ retina
CTGCTGCTTC
(
2
)
3.8
0.0038
Adult retinal
GGAAGATGCT
(
2
)
27.8
0.0278
Adult retinal
CTGCTGCTTC
(
2
)
7.4
0.0074
Adult retinal
GACCCAGCTC
(
3
)
1.9
0.0019
ONL
GGAAGATGCT
(
2
)
9.6
0.0096
ONL
GACCCAGCTC
(
3
)
1.9
0.0019
ONL
GGAACCTTGG
1.9
0.0019
