Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.250419	Ccni	cyclin I	5	5 E3.3-F1.3	12453
Gene Ontology	cyclin-dependent protein kinase regulator activity | regulation of cell cycle
Human Homolog	CCNI[cyclin I]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 3 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACTGCTGAT 45.7 0.0457 P8 Cb GC TTTCTTTGGT 9.8 0.0098 P8 Cb GC AATCAGTGGC (3) 8.2 0.0082 P8 Cb GC TGCTTTATCA (2) 4.9 0.0049 P8 Cb GC AAGTTTCCAG (2) 3.3 0.0033 P8 Cb GC ATAGAGAAGG 3.3 0.0033 Cb medulloblastoma TACTGCTGAT 41.6 0.0416 Cb medulloblastoma AATCAGTGGC (3) 4.6 0.0046 Cb medulloblastoma TGCTTTATCA (2) 4.6 0.0046 Cb medulloblastoma TTTCTTTGGT 4.6 0.0046 P8 GC+1d culture TACTGCTGAT 71.9 0.0719 P8 GC+1d culture TTTCTTTGGT 4.6 0.0046 P8 GC+1d culture AATCAGTGGC (3) 2.3 0.0023 P8 GC+SHH+1d culture TACTGCTGAT 72.6 0.0726 P8 GC+SHH+1d culture TTTCTTTGGT 7 0.007 P8 GC+SHH+1d culture TATGTAATAT (2) 3.5 0.0035 P8 GC+SHH+1d culture TGCTTTATCA (2) 3.5 0.0035 P8 GC+SHH+1d culture AATCAGTGGC (3) 1.2 0.0012 3T3 fibroblasts AAGTTTCCAG (2) 3.5 0.0035 3T3 fibroblasts AATCAGTGGC (3) 3.5 0.0035 3T3 fibroblasts TGCTTTATCA (2) 3.5 0.0035 E15 cortex TACTGCTGAT 9.9 0.0099 E15 cortex TGCTTTATCA (2) 9.9 0.0099 P1 cortex TACTGCTGAT 9.1 0.0091 P1 cortex TTTCTTTGGT 9.1 0.0091 P1 cortex TGCTTTATCA (2) 4.5 0.0045 Hypothalamus TACTGCTGAT 23.5 0.0235 Hypothalamus ATAGAGAAGG 1.8 0.0018 Hypothalamus TTTCTTTGGT 1.8 0.0018 E12.5 retina TACTGCTGAT 30 0.03 E12.5 retina AATCAGTGGC (3) 7.5 0.0075 E12.5 retina TGCTTTATCA (2) 3.8 0.0038 E12.5 retina ATAGAGAAGG 1.9 0.0019 E12.5 retina GTATCCCTTT 1.9 0.0019 E14.5 retina TACTGCTGAT 21.9 0.0219 E14.5 retina TGCTTTATCA (2) 1.8 0.0018 E16.5 retina TACTGCTGAT 19.9 0.0199 E16.5 retina TGCTTTATCA (2) 3.6 0.0036 E16.5 retina TTTCTTTGGT 3.6 0.0036 E16.5 retina AATCAGTGGC (3) 1.8 0.0018 E16.5 retina ATAGAGAAGG 1.8 0.0018 E18.5 retina TACTGCTGAT 45.5 0.0455 E18.5 retina AATCAGTGGC (3) 1.8 0.0018 E18.5 retina TTTCTTTGGT 1.8 0.0018 P0.5 retina TACTGCTGAT 23.6 0.0236 P0.5 retina TGCTTTATCA (2) 3.9 0.0039 P0.5 retina TTTCTTTGGT 3.9 0.0039 P0.5 retina GTATCCCTTT 2 0.002 P2.5 retina TACTGCTGAT 24.6 0.0246 P2.5 retina ATAGAGAAGG 1.8 0.0018 P2.5 retina TGCTTTATCA (2) 1.8 0.0018 P2.5 retina TTTCTTTGGT 1.8 0.0018 P4.5 retina TACTGCTGAT 51.5 0.0515 P6.5 retina TACTGCTGAT 23.3 0.0233 P6.5 retina TGCTTTATCA (2) 3.3 0.0033 P6.5 retina TTTCTTTGGT 3.3 0.0033 P6.5 retina AATCAGTGGC (3) 1.7 0.0017 P10.5 crx- retina TACTGCTGAT 29.7 0.0297 P10.5 crx- retina TATGTAATAT (2) 3.7 0.0037 P10.5 crx- retina AAGTTTCCAG (2) 1.9 0.0019 P10.5 crx- retina ATAGAGAAGG 1.9 0.0019 P10.5 crx+ retina TACTGCTGAT 17.3 0.0173 P10.5 crx+ retina AATCAGTGGC (3) 9.6 0.0096 P10.5 crx+ retina TTTCTTTGGT 3.8 0.0038 P10.5 crx+ retina GTATCCCTTT 1.9 0.0019 Adult retinal TACTGCTGAT 13 0.013 Adult retinal TGCTTTATCA (2) 1.9 0.0019 Adult retinal TTTCTTTGGT 1.9 0.0019 ONL TACTGCTGAT 11.5 0.0115 ONL AATCAGTGGC (3) 1.9 0.0019 ONL ATAGAGAAGG 1.9 0.0019