Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261570	6030441I21Rik	RIKEN cDNA 6030441I21 gene	5		114678
Mm.261570	Gtf2i	general transcription factor II I	5	5 75.0 cM	14886
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	GTF2I[general transcription factor II, i]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTCAAAA (2) 13.1 0.0131 P8 Cb GC AGGAGGATCT (3) 1.6 0.0016 P8 Cb GC CCTTTCACAA (2) 1.6 0.0016 Cb medulloblastoma CCTTTCAAAA (2) 9.2 0.0092 Cb medulloblastoma AGCTTCTGAA (2) 2.3 0.0023 Cb medulloblastoma CTTTCAAAAA (3) 2.3 0.0023 P8 GC+1d culture CCTTTCAAAA (2) 3.4 0.0034 P8 GC+1d culture CTTGAGCAGG (2) 2.3 0.0023 P8 GC+1d culture CAGACCTGAC (2) 1.1 0.0011 P8 GC+1d culture GATGGATTTT (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTCAAAA (2) 12.9 0.0129 P8 GC+SHH+1d culture CTTGAGCAGG (2) 2.3 0.0023 P8 GC+SHH+1d culture CTTTCAAAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture AGCTTCTGAA (2) 1.2 0.0012 E15 cortex CCTTTCAAAA (2) 9.9 0.0099 P1 cortex CTTGAGCAGG (2) 4.5 0.0045 Hypothalamus CCTTTCAAAA (2) 9.1 0.0091 Hypothalamus GATGGATTTT (2) 1.8 0.0018 E12.5 retina CCTTTCAAAA (2) 11.3 0.0113 E14.5 retina CCTTTCAAAA (2) 20 0.02 E14.5 retina CCTTTCACAA (2) 1.8 0.0018 E16.5 retina CCTTTCAAAA (2) 9.1 0.0091 E16.5 retina CAGACCTGAC (2) 1.8 0.0018 E16.5 retina GATGGATTTT (2) 1.8 0.0018 E16.5 retina GTGAGATTCT (2) 1.8 0.0018 E18.5 retina CCTTTCAAAA (2) 25.5 0.0255 E18.5 retina GATGGATTTT (2) 1.8 0.0018 P0.5 retina CCTTTCAAAA (2) 5.9 0.0059 P0.5 retina CAGACCTGAC (2) 3.9 0.0039 P0.5 retina CTTGAGCAGG (2) 2 0.002 P2.5 retina CCTTTCAAAA (2) 10.6 0.0106 P4.5 retina CCTTTCAAAA (2) 13.9 0.0139 P4.5 retina GATGGATTTT (2) 4 0.004 P4.5 retina AGCTTCTGAA (2) 2 0.002 P4.5 retina CCTTTCACAA (2) 2 0.002 P6.5 retina CCTTTCAAAA (2) 11.7 0.0117 P6.5 retina AGGAGGATCT (3) 1.7 0.0017 P6.5 retina CAGACCTGAC (2) 1.7 0.0017 P6.5 retina GATGGATTTT (2) 1.7 0.0017 P10.5 crx- retina CCTTTCAAAA (2) 7.4 0.0074 P10.5 crx- retina GATGGATTTT (2) 3.7 0.0037 P10.5 crx- retina CAGACCTGAC (2) 1.9 0.0019 P10.5 crx- retina CTTGAGCAGG (2) 1.9 0.0019 P10.5 crx+ retina CCTTTCAAAA (2) 7.7 0.0077 P10.5 crx+ retina CAGACCTGAC (2) 1.9 0.0019 Adult retinal CCTTTCAAAA (2) 3.7 0.0037 Adult retinal GTGAGATTCT (2) 3.7 0.0037 Adult retinal CTTGAGCAGG (2) 1.9 0.0019 ONL CCTTTCAAAA (2) 7.7 0.0077 ONL AGGAGGATCT (3) 1.9 0.0019 ONL GATGGATTTT (2) 1.9 0.0019