Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277661	Lrpap1	low density lipoprotein receptor-related protein associated protein 1	5	5 20.0 cM	16976
Gene Ontology	endoplasmic reticulum | extracellular space | heparin binding | receptor activity
Human Homolog	LRPAP1[low density lipoprotein receptor-related protein associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTACCTGTA 13.1 0.0131 P8 Cb GC GCAGAGTTTT 4.9 0.0049 P8 Cb GC GGTTCACACA 4.9 0.0049 Cb medulloblastoma GCAGAGTTTT 34.7 0.0347 Cb medulloblastoma GGTTCACACA 16.2 0.0162 Cb medulloblastoma GAGAACCTGA 2.3 0.0023 Cb medulloblastoma GGCCCACATC (4) 2.3 0.0023 P8 GC+1d culture GCAGAGTTTT 19.4 0.0194 P8 GC+1d culture GGTTCACACA 19.4 0.0194 P8 GC+1d culture GGCCCACATC (4) 2.3 0.0023 P8 GC+1d culture GAGAAGCTGA (2) 1.1 0.0011 P8 GC+1d culture GCCCACATCA (2) 1.1 0.0011 P8 GC+1d culture TCATCGGCTT 1.1 0.0011 P8 GC+SHH+1d culture GCAGAGTTTT 17.6 0.0176 P8 GC+SHH+1d culture GGTTCACACA 7 0.007 P8 GC+SHH+1d culture GGCCCACATC (4) 1.2 0.0012 3T3 fibroblasts GCCCACATCA (2) 3.5 0.0035 E15 cortex GCAGAGTTTT 24.7 0.0247 E15 cortex GGCCCACATC (4) 4.9 0.0049 P1 cortex GAGAAGCTGA (2) 4.5 0.0045 P1 cortex GCCCACATCA (2) 4.5 0.0045 P1 cortex GGCCCACATC (4) 4.5 0.0045 Hypothalamus GCAGAGTTTT 32.6 0.0326 Hypothalamus GGCCCACATC (4) 10.9 0.0109 Hypothalamus GGTTCACACA 10.9 0.0109 Hypothalamus GCCCACATCA (2) 5.4 0.0054 Hypothalamus GAGAAGCTGA (2) 1.8 0.0018 E12.5 retina GCAGAGTTTT 9.4 0.0094 E12.5 retina GGTTCACACA 5.6 0.0056 E12.5 retina GCCCACATCA (2) 1.9 0.0019 E12.5 retina GGCCCACATC (4) 1.9 0.0019 E14.5 retina GCAGAGTTTT 10.9 0.0109 E14.5 retina GGTTCACACA 7.3 0.0073 E16.5 retina GCAGAGTTTT 7.2 0.0072 E16.5 retina GGTTCACACA 5.4 0.0054 E16.5 retina GGCCCACATC (4) 3.6 0.0036 E18.5 retina GCAGAGTTTT 18.2 0.0182 E18.5 retina GGTTCACACA 10.9 0.0109 E18.5 retina GGCCCACATC (4) 1.8 0.0018 P0.5 retina GAGAACCTGA 2 0.002 P0.5 retina GCAGAGTTTT 2 0.002 P0.5 retina GCCCACATCA (2) 2 0.002 P0.5 retina GGTTCACACA 2 0.002 P2.5 retina GCAGAGTTTT 12.3 0.0123 P2.5 retina GGTTCACACA 8.8 0.0088 P4.5 retina GCAGAGTTTT 27.7 0.0277 P4.5 retina GGTTCACACA 19.8 0.0198 P6.5 retina GCAGAGTTTT 11.7 0.0117 P6.5 retina GGCCCACATC (4) 3.3 0.0033 P6.5 retina GGTTCACACA 1.7 0.0017 P6.5 retina TGTACCTGTA 1.7 0.0017 P10.5 crx- retina GGTTCACACA 13 0.013 P10.5 crx- retina GCAGAGTTTT 11.1 0.0111 P10.5 crx- retina TCATCGGCTT 3.7 0.0037 P10.5 crx- retina GGCCCACATC (4) 1.9 0.0019 P10.5 crx+ retina GCAGAGTTTT 25 0.025 P10.5 crx+ retina GGTTCACACA 7.7 0.0077 P10.5 crx+ retina GAGAAGCTGA (2) 1.9 0.0019 Adult retinal GCAGAGTTTT 11.1 0.0111 Adult retinal GGCCCACATC (4) 5.6 0.0056 Adult retinal GGTTCACACA 5.6 0.0056 ONL GGTTCACACA 7.7 0.0077 ONL GAGAACCTGA 1.9 0.0019