Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277661	Lrpap1	low density lipoprotein receptor-related protein associated protein 1	5	5 20.0 cM	16976
Gene Ontology	endoplasmic reticulum | extracellular space | heparin binding | receptor activity
Human Homolog	LRPAP1[low density lipoprotein receptor-related protein associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 179 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACCTGTTCT GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGTTCACACA TGTACCTGTA TGTACTGGCA (3) 71.8 0.0718 Cb medulloblastoma AACATACAAG GAGAACCTGA GAGAAGCCTG (2) GCAGAGTGTT (5) GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGAGAAGCTG (2) GGCCCACATC (4) GGCCCCACCA GGTTCACACA TGTACTGGCA (3) 83.1 0.0831 P8 GC+1d culture AACATACAAG GAGAAGCCTG (2) GAGAAGCTGA (2) GCAGAGTTTG GCAGAGTTTT GCCCACATCA (2) GCCCACATCC (4) GGAGAAGCTG (2) GGCCCACATC (4) GGTTCACACA TCATCGGCTT TGTACTGGCA (3) 141.3 0.1413 P8 GC+SHH+1d culture AACCTGTTCT CCCTGGGTTT GAGAAGCCTG (2) GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGAGAAGCTG (2) GGCCCACATC (4) GGTTCACACA TGTACTGGCA (3) 98.4 0.0984 3T3 fibroblasts CCCTGGGTTT GAGAAGCCTG (2) GCCCACATCA (2) GCCCACATCC (4) GTCATAGCTG (2) 31.5 0.0315 E15 cortex GCAGAGTGTT (5) GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGCCCACATC (4) GTCATAGCTG (2) 69 0.069 P1 cortex AACATACAAG GAGAAACTGA GAGAAGCTGA (2) GCCCACATCA (2) GGCCCACATC (4) TGTACTGGCA (3) 68 0.068 Hypothalamus ACTCTGAGCA GAGAAACTGA GAGAAGCCTG (2) GAGAAGCTGA (2) GCAGAGTTTG GCAGAGTTTT GCCCACATCA (2) GGCCACATCA (2) GGCCCACATC (4) GGCCCCACCA GGTTCACACA TGTACTGGCA (3) 83.2 0.0832 E12.5 retina GAGAAGCCTG (2) GCAGAGTGTT (5) GCAGAGTTTG GCAGAGTTTT GCCCACATCA (2) GCCCACATCC (4) GGCCCACATC (4) GGTTCACACA 69.6 0.0696 E14.5 retina AACATACAAG ACTCTGAGCA CCCTGGGTTT GCAGAGTGTT (5) GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGCCACATCA (2) GGTTCACACA TGTACTGGCA (3) 98.3 0.0983 E16.5 retina AACATACAAG GAGAAGCCTG (2) GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGAGAAGCTG (2) GGCCACATCA (2) GGCCCACATC (4) GGTTCACACA TGTACTGGCA (3) 106.7 0.1067 E18.5 retina GAGAAGCCTG (2) GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGCCACATCA (2) GGCCCACATC (4) GGTTCACACA TGTACTGGCA (3) 67.2 0.0672 P0.5 retina CCCTGGGTTT GAGAACCTGA GCAGAGTTTG GCAGAGTTTT GCCCACATCA (2) GCCCACATCC (4) GGTTCACACA GTCATAGCTG (2) TGTACTGGCA (3) 67 0.067 P2.5 retina AACATACAAG GCAGAGTGTT (5) GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGAGAAGCTG (2) GGCCACATCA (2) GGTTCACACA GTCATAGCTG (2) TGTACTGGCA (3) 72.4 0.0724 P4.5 retina CCCTGGGTTT GCAGAGTTTT GCCCACATCC (4) GGAGAAGCTG (2) GGCCACATCA (2) GGCCCCACCA GGTTCACACA GTCATAGCTG (2) TGTACTGGCA (3) 93.2 0.0932 P6.5 retina GAGAAGCCTG (2) GCAGAGTGTT (5) GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGCCCACATC (4) GGTTCACACA GTCATAGCTG (2) TGTACCTGTA 40 0.04 P10.5 crx- retina AACATACAAG AACCTGTTCT GAGAAGCCTG (2) GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGAGAAGCTG (2) GGCCCACATC (4) GGTTCACACA TCATCGGCTT TGTACTGGCA (3) 55.8 0.0558 P10.5 crx+ retina ACTCTGAGCA GAGAAGCCTG (2) GAGAAGCTGA (2) GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGAGAAGCTG (2) GGCCACATCA (2) GGTTCACACA TGTACTGGCA (3) 69.1 0.0691 Adult retinal AACATACAAG GAGAAACTGA GAGAAGCCTG (2) GCAGAGTTTG GCAGAGTTTT GCCCACATCC (4) GGCCCACATC (4) GGTTCACACA GTCATAGCTG (2) 35.5 0.0355 ONL AACATACAAG GAGAACCTGA GCAGAGTTTG GCCCACATCC (4) GGTTCACACA GTCATAGCTG (2) 36.4 0.0364