Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29324	Ldh1	lactate dehydrogenase 1, A chain	7	7 23.5 cM	16828
Gene Ontology	glycolysis | L-lactate dehydrogenase activity | oxidoreductase activity
Human Homolog	LDHA[lactate dehydrogenase A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAAATAAAA 21.2 0.0212 P8 Cb GC GCAAATAAAA (3) 3.3 0.0033 P8 Cb GC CCCATTTCCC 1.6 0.0016 P8 Cb GC GCAGCCCTCT (2) 1.6 0.0016 Cb medulloblastoma CCAAATAAAA 16.2 0.0162 Cb medulloblastoma GCAGCCCTCT (2) 4.6 0.0046 Cb medulloblastoma GACGTACACA (3) 2.3 0.0023 Cb medulloblastoma GCAAATAAAA (3) 2.3 0.0023 Cb medulloblastoma GCTTGTGCCA (2) 2.3 0.0023 Cb medulloblastoma TGCCTGTGTG 2.3 0.0023 P8 GC+1d culture CCAAATAAAA 27.4 0.0274 P8 GC+1d culture CCCATTTCCC 2.3 0.0023 P8 GC+1d culture ATGCATATCT 1.1 0.0011 P8 GC+1d culture GCAAATAAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture CCAAATAAAA 46.8 0.0468 P8 GC+SHH+1d culture GCAAATAAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture CCCATTTCCC 1.2 0.0012 3T3 fibroblasts CCAAATAAAA 10.5 0.0105 3T3 fibroblasts GCGACTCCAG 3.5 0.0035 E15 cortex CCAAATAAAA 29.7 0.0297 P1 cortex CCAAATAAAA 18.2 0.0182 P1 cortex GCTTGTGCCA (2) 4.5 0.0045 P1 cortex TGCCTGTGTG 4.5 0.0045 Hypothalamus CCAAATAAAA 14.5 0.0145 Hypothalamus GACGTACACA (3) 1.8 0.0018 Hypothalamus GCAAATAAAA (3) 1.8 0.0018 E12.5 retina CCAAATAAAA 114.5 0.1145 E12.5 retina GACGTACACA (3) 3.8 0.0038 E12.5 retina GCAGCCTCTT (3) 1.9 0.0019 E14.5 retina CCAAATAAAA 67.4 0.0674 E14.5 retina TTTGGTGCAG 9.1 0.0091 E14.5 retina CCAAAATAAA (2) 1.8 0.0018 E14.5 retina CCCATTTCCC 1.8 0.0018 E14.5 retina GCAGCCCTCT (2) 1.8 0.0018 E14.5 retina GCAGCCTCTT (3) 1.8 0.0018 E14.5 retina GCTTGTGCCA (2) 1.8 0.0018 E14.5 retina TATCCTGGGA 1.8 0.0018 E16.5 retina CCAAATAAAA 157.6 0.1576 E16.5 retina TTTGGTGCAG 9.1 0.0091 E16.5 retina ATGCATATCT 1.8 0.0018 E16.5 retina CCAAAATAAA (2) 1.8 0.0018 E16.5 retina GCAGCCCTCT (2) 1.8 0.0018 E16.5 retina TATCCTGGGA 1.8 0.0018 E18.5 retina CCAAATAAAA 245.6 0.2456 E18.5 retina ATGCATATCT 1.8 0.0018 P0.5 retina CCAAATAAAA 39.3 0.0393 P0.5 retina CCCATTTCCC 2 0.002 P0.5 retina TTTGGTGCAG 2 0.002 P2.5 retina CCAAATAAAA 160.1 0.1601 P2.5 retina TTTGGTGCAG 3.5 0.0035 P2.5 retina CCAAAATAAA (2) 1.8 0.0018 P2.5 retina CCCATTTCCC 1.8 0.0018 P2.5 retina GCAAATAAAA (3) 1.8 0.0018 P4.5 retina CCAAATAAAA 237.8 0.2378 P4.5 retina CCAAAATAAA (2) 5.9 0.0059 P4.5 retina GCAAATAAAA (3) 5.9 0.0059 P4.5 retina ATGCATATCT 2 0.002 P4.5 retina GCAGCCTCTT (3) 2 0.002 P4.5 retina TGCCTGTGTG 2 0.002 P6.5 retina CCAAATAAAA 175.1 0.1751 P6.5 retina TTTGGTGCAG 5 0.005 P6.5 retina ATGCATATCT 3.3 0.0033 P6.5 retina GCAGCCTCTT (3) 3.3 0.0033 P6.5 retina CCAAAATAAA (2) 1.7 0.0017 P6.5 retina TGCCTGTGTG 1.7 0.0017 P10.5 crx- retina CCAAATAAAA 144.9 0.1449 P10.5 crx- retina TTTGGTGCAG 18.6 0.0186 P10.5 crx- retina ATGCATATCT 1.9 0.0019 P10.5 crx- retina GCAGCCTCTT (3) 1.9 0.0019 P10.5 crx- retina GCGACTCCAG 1.9 0.0019 P10.5 crx- retina TATCCTGGGA 1.9 0.0019 P10.5 crx+ retina CCAAATAAAA 213.4 0.2134 P10.5 crx+ retina GCGACTCCCA 7.7 0.0077 P10.5 crx+ retina CCAAAATAAA (2) 1.9 0.0019 P10.5 crx+ retina GCAGCCCTCT (2) 1.9 0.0019 P10.5 crx+ retina TTTGGTGCAG 1.9 0.0019 Adult retinal CCAAATAAAA 79.6 0.0796 Adult retinal TGCCTGTGTG 5.6 0.0056 Adult retinal GCAGCCCTCT (2) 3.7 0.0037 Adult retinal GCGACTCCAG 3.7 0.0037 Adult retinal ATGCATATCT 1.9 0.0019 ONL CCAAATAAAA 63.2 0.0632 ONL ATGCATATCT 1.9 0.0019 ONL GCGACTCCCA 1.9 0.0019 ONL TTTGGTGCAG 1.9 0.0019