Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296158	1300006C19Rik	RIKEN cDNA 1300006C19 gene	9		68292
Gene Ontology	biological_process unknown | cellular_component unknown | transferase activity
Human Homolog	SIMP[source of immunodominant MHC-associated peptides]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCTGTTTCA 3.3 0.0033 P8 Cb GC GAATCTGCTC 1.6 0.0016 P8 Cb GC GAGTGGCAGG (2) 1.6 0.0016 P8 Cb GC TGTTTGTGTT (3) 1.6 0.0016 Cb medulloblastoma AGGGAAATAA (3) 2.3 0.0023 Cb medulloblastoma AGGGAATAAG 2.3 0.0023 P8 GC+1d culture GAACTGTAAA 2.3 0.0023 P8 GC+1d culture TTTTTATACC 2.3 0.0023 P8 GC+SHH+1d culture TCCTGTTTCA 4.7 0.0047 P8 GC+SHH+1d culture AGGGAAATAA (3) 3.5 0.0035 P8 GC+SHH+1d culture CGTACCTGTC 3.5 0.0035 P8 GC+SHH+1d culture AGGGAATAAG 2.3 0.0023 P8 GC+SHH+1d culture TGCCAGGGAC 2.3 0.0023 P8 GC+SHH+1d culture GAATCTGCTC 1.2 0.0012 3T3 fibroblasts GAATCTGCTC 3.5 0.0035 3T3 fibroblasts TGCCAGGGAC 3.5 0.0035 P1 cortex TTTTTATACC 4.5 0.0045 Hypothalamus GAACTGTAAA 1.8 0.0018 E12.5 retina TGCCAGGGAC 5.6 0.0056 E12.5 retina AGGGAAATAA (3) 1.9 0.0019 E12.5 retina GAACTGTAAA 1.9 0.0019 E12.5 retina GAATCTGCTC 1.9 0.0019 E12.5 retina TTTTTATACC 1.9 0.0019 E14.5 retina AGGGAAATAA (3) 5.5 0.0055 E14.5 retina GAACTGTAAA 1.8 0.0018 E14.5 retina GAGTGGCAGG (2) 1.8 0.0018 E14.5 retina TCCTGTTTCA 1.8 0.0018 E14.5 retina TTTTTATACC 1.8 0.0018 E16.5 retina GAGTGGCAGG (2) 1.8 0.0018 E18.5 retina AGGGAAATAA (3) 3.6 0.0036 E18.5 retina CGTACCTGTC 1.8 0.0018 E18.5 retina TCCTGTTTCA 1.8 0.0018 P0.5 retina AGGGAAATAA (3) 2 0.002 P0.5 retina GAACTGTAAA 2 0.002 P0.5 retina TCCTGTTTCA 2 0.002 P0.5 retina TGTTTGTGTT (3) 2 0.002 P2.5 retina AGGGAAATAA (3) 5.3 0.0053 P2.5 retina TCCTGTTTCA 3.5 0.0035 P2.5 retina TGCCAGGGAC 3.5 0.0035 P2.5 retina CGTACCTGTC 1.8 0.0018 P2.5 retina GAACTGTAAA 1.8 0.0018 P4.5 retina AGGGAAATAA (3) 7.9 0.0079 P4.5 retina TGCCAGGGAC 5.9 0.0059 P4.5 retina GAACTGTAAA 2 0.002 P4.5 retina TCCTGTTTCA 2 0.002 P6.5 retina AGGGAAATAA (3) 1.7 0.0017 P6.5 retina TTTTTATACC 1.7 0.0017 P10.5 crx- retina AGGGAAATAA (3) 3.7 0.0037 P10.5 crx+ retina GAACTGTAAA 1.9 0.0019 P10.5 crx+ retina GAATCTGCTC 1.9 0.0019 P10.5 crx+ retina GAGTGGCAGG (2) 1.9 0.0019 Adult retinal CGTACCTGTC 1.9 0.0019 Adult retinal TGCCAGGGAC 1.9 0.0019 Adult retinal TTTTTATACC 1.9 0.0019 ONL AGGGAAATAA (3) 1.9 0.0019 ONL TGTTTGTGTT (3) 1.9 0.0019