Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.300639	0610009L18Rik	RIKEN cDNA 0610009L18 gene	11		66838
Mm.300639	Actg1	actin, gamma, cytoplasmic 1	11		11465
Gene Ontology	cytoskeleton | cytoskeleton organization and biogenesis | structural constituent of cytoskeleton
Human Homolog	ACTG1[actin, gamma 1] | ACTG1[actin, gamma 1] | ACTG1[actin, gamma 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGCTCGGTC (3) 110.9 0.1109 P8 Cb GC TGGCTCAGTC (2) 4.9 0.0049 P8 Cb GC AAACTGGAAT (2) 3.3 0.0033 P8 Cb GC TACCCAGGCA (2) 3.3 0.0033 P8 Cb GC TGGCCTGGGT (2) 3.3 0.0033 P8 Cb GC AACTAAGGAC (2) 1.6 0.0016 P8 Cb GC AGAAAGCCCC (3) 1.6 0.0016 P8 Cb GC CGGCTCGGTC (2) 1.6 0.0016 P8 Cb GC GGTGTGGCTG (3) 1.6 0.0016 P8 Cb GC TACCCCAGGC (2) 1.6 0.0016 P8 Cb GC TCGTCCCAGT (2) 1.6 0.0016 P8 Cb GC TGGGCCTCGG (2) 1.6 0.0016 Cb medulloblastoma TGGCTCGGTC (3) 53.2 0.0532 Cb medulloblastoma GGGGCTGGGG (2) 4.6 0.0046 Cb medulloblastoma AAACTGGAAT (2) 2.3 0.0023 P8 GC+1d culture TGGCTCGGTC (3) 207.8 0.2078 P8 GC+1d culture CGGCTCGGTC (2) 3.4 0.0034 P8 GC+1d culture AAACTGGAAT (2) 2.3 0.0023 P8 GC+1d culture GGGGCTGGGG (2) 1.1 0.0011 P8 GC+1d culture TACCCAGGCA (2) 1.1 0.0011 P8 GC+1d culture TCGTCCCAGT (2) 1.1 0.0011 P8 GC+1d culture TGGGCCTCGG (2) 1.1 0.0011 P8 GC+SHH+1d culture TGGCTCGGTC (3) 110.1 0.1101 P8 GC+SHH+1d culture GGGGCTGGGG (2) 3.5 0.0035 P8 GC+SHH+1d culture AAACTGGAAT (2) 1.2 0.0012 P8 GC+SHH+1d culture AACTAAGGAC (2) 1.2 0.0012 P8 GC+SHH+1d culture AGAAAGCCCC (3) 1.2 0.0012 P8 GC+SHH+1d culture CGGCTCGGTC (2) 1.2 0.0012 3T3 fibroblasts TGGCTCGGTC (3) 301.4 0.3014 E15 cortex TGGCTCGGTC (3) 217.7 0.2177 E15 cortex TACCCAGGCA (2) 19.8 0.0198 E15 cortex AAACTGGAAT (2) 14.8 0.0148 E15 cortex CGGCTCGGTC (2) 9.9 0.0099 E15 cortex GGTGTGGCTG (3) 4.9 0.0049 E15 cortex TGGCCCGGTC (2) 4.9 0.0049 P1 cortex TGGCTCGGTC (3) 113.6 0.1136 P1 cortex GGTAAAGAAT (2) 9.1 0.0091 Hypothalamus TGGCTCGGTC (3) 41.7 0.0417 Hypothalamus AAACTGGAAT (2) 1.8 0.0018 Hypothalamus GGGGCTGGGG (2) 1.8 0.0018 Hypothalamus TACCCCAGGC (2) 1.8 0.0018 E12.5 retina TGGCTCGGTC (3) 26.3 0.0263 E12.5 retina AAACTGGAAT (2) 1.9 0.0019 E14.5 retina TGGCTCGGTC (3) 34.6 0.0346 E14.5 retina GGGGCTGGGG (2) 7.3 0.0073 E14.5 retina AAACTGGAAT (2) 3.6 0.0036 E14.5 retina GGTGTGGCTG (3) 1.8 0.0018 E14.5 retina TACCCAGGCA (2) 1.8 0.0018 E14.5 retina TCGTCCCAGT (2) 1.8 0.0018 E16.5 retina TGGCTCGGTC (3) 38 0.038 E16.5 retina AAACTGGAAT (2) 10.9 0.0109 E16.5 retina GGGGCTGGGG (2) 1.8 0.0018 E16.5 retina TACCCAGGCA (2) 1.8 0.0018 E18.5 retina TGGCTCGGTC (3) 18.2 0.0182 E18.5 retina GGGGCTGGGG (2) 3.6 0.0036 E18.5 retina TACCCAGGCA (2) 3.6 0.0036 E18.5 retina AAACTGGAAT (2) 1.8 0.0018 E18.5 retina AGAAAGCCCC (3) 1.8 0.0018 E18.5 retina TACCCCAGGC (2) 1.8 0.0018 E18.5 retina TGGCCTGGGT (2) 1.8 0.0018 E18.5 retina TGGGCCTCGG (2) 1.8 0.0018 P0.5 retina TGGCTCGGTC (3) 149.2 0.1492 P0.5 retina AAACTGGAAT (2) 2 0.002 P0.5 retina CGGCTCGGTC (2) 2 0.002 P0.5 retina TACCCAGGCA (2) 2 0.002 P0.5 retina TGGCCCGGTC (2) 2 0.002 P2.5 retina TGGCTCGGTC (3) 31.7 0.0317 P2.5 retina AAAGATCCCT (3) 1.8 0.0018 P2.5 retina GGTAAAGAAT (2) 1.8 0.0018 P2.5 retina GGTGTGGCTG (3) 1.8 0.0018 P4.5 retina TGGCTCGGTC (3) 29.7 0.0297 P4.5 retina AAACTGGAAT (2) 5.9 0.0059 P4.5 retina TGGCTCAGTC (2) 2 0.002 P6.5 retina TGGCTCGGTC (3) 51.7 0.0517 P6.5 retina GGGGCTGGGG (2) 3.3 0.0033 P6.5 retina AAACTGGAAT (2) 1.7 0.0017 P6.5 retina AACTAAGGAC (2) 1.7 0.0017 P6.5 retina TACCCAGGCA (2) 1.7 0.0017 P6.5 retina TGGCTCAGTC (2) 1.7 0.0017 P10.5 crx- retina TGGCTCGGTC (3) 65 0.065 P10.5 crx- retina AAACTGGAAT (2) 7.4 0.0074 P10.5 crx- retina GGGGCTGGGG (2) 3.7 0.0037 P10.5 crx- retina AAAGATCCCT (3) 1.9 0.0019 P10.5 crx+ retina TGGCTCGGTC (3) 42.3 0.0423 P10.5 crx+ retina GGGGCTGGGG (2) 5.8 0.0058 P10.5 crx+ retina TACCCAGGCA (2) 1.9 0.0019 Adult retinal TGGCTCGGTC (3) 53.7 0.0537 Adult retinal GGGGCTGGGG (2) 9.3 0.0093 Adult retinal AAAGATCCCT (3) 1.9 0.0019 Adult retinal TGGCCCGGTC (2) 1.9 0.0019 ONL TGGCTCGGTC (3) 3.8 0.0038