Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.308500	Pcdha2	protocadherin alpha 2	18		353234
Mm.308500	Pcdha8	protocadherin alpha 8	18		353235
Mm.308500	Pcdhac1	protocadherin alpha subfamily C, 1	18		353236
Mm.308500	C130024J02Rik	RIKEN cDNA C130024J02 gene	18		320573
Mm.308500	Pcdha4	protocadherin alpha 4	18		12936
Mm.308500	Pcdha6	protocadherin alpha 6	18		12937
Mm.308500	Pcdha7	protocadherin alpha 7	18		12939
Mm.308500	Pcdha5	protocadherin alpha 5	18		12941
Mm.308500	Pcdha11	protocadherin alpha 11	18		12942
Mm.308500	Pcdha10	protocadherin alpha 10	18		12943
Gene Ontology	calcium ion binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGATTCATT (10) 3.3 0.0033 Cb medulloblastoma TGGATTCATT (10) 11.6 0.0116 Cb medulloblastoma CACAGCTCTG (20) 2.3 0.0023 P8 GC+1d culture CAATCCTGCA (10) 2.3 0.0023 P8 GC+1d culture TGGATTCATT (10) 2.3 0.0023 P8 GC+1d culture CATACAGTGA (10) 1.1 0.0011 P8 GC+SHH+1d culture TGGATTCATT (10) 4.7 0.0047 P8 GC+SHH+1d culture CATACAGTGA (10) 1.2 0.0012 P1 cortex CACAGCTCTG (20) 18.2 0.0182 P1 cortex CATACAGTGA (10) 13.6 0.0136 P1 cortex TGGATTCATT (10) 13.6 0.0136 P1 cortex CAATCCTGCA (10) 4.5 0.0045 Hypothalamus TGGATTCATT (10) 5.4 0.0054 Hypothalamus CATACAGTGA (10) 1.8 0.0018 E18.5 retina TGGATTCATT (10) 3.6 0.0036 P0.5 retina CATACAGTGA (10) 3.9 0.0039 P0.5 retina TGGATTCATT (10) 2 0.002 P2.5 retina TGGATTCATT (10) 3.5 0.0035 P4.5 retina TGGATTCATT (10) 4 0.004 P6.5 retina TGGATTCATT (10) 1.7 0.0017 P10.5 crx- retina CAATCCTGCA (10) 1.9 0.0019 P10.5 crx- retina CATACAGTGA (10) 1.9 0.0019 P10.5 crx+ retina TGGATTCATT (10) 5.8 0.0058 P10.5 crx+ retina CATACAGTGA (10) 1.9 0.0019 Adult retinal CATACAGTGA (10) 5.6 0.0056 Adult retinal CACAGCTCTG (20) 1.9 0.0019 Adult retinal TGGATTCATT (10) 1.9 0.0019 ONL TGGATTCATT (10) 1.9 0.0019