Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3158	Rplp1	ribosomal protein, large, P1	9		56040
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome | translational elongation
Human Homolog	RPLP1[ribosomal protein, large, P1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 141 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTTCGGTC 420.9 0.4209 P8 Cb GC CTGTAGACTG 14.7 0.0147 P8 Cb GC GCTTCGGTCT 3.3 0.0033 P8 Cb GC TGCTTCGGTC 3.3 0.0033 P8 Cb GC AGCTTCGGTC 1.6 0.0016 P8 Cb GC CAAGAGCCCA 1.6 0.0016 P8 Cb GC CTGTAAACTG 1.6 0.0016 P8 Cb GC TCATCTTCAG 1.6 0.0016 Cb medulloblastoma GGCTTTGGTC 143.4 0.1434 Cb medulloblastoma GGCTTCGGTC 117.9 0.1179 Cb medulloblastoma CTGTAGACTG 6.9 0.0069 Cb medulloblastoma CTGTAAACTG 2.3 0.0023 Cb medulloblastoma GCTTCCGTCT 2.3 0.0023 Cb medulloblastoma GCTTCGGTCT 2.3 0.0023 Cb medulloblastoma GGCTTTGGTT 2.3 0.0023 Cb medulloblastoma TGCTTCGGTC 2.3 0.0023 P8 GC+1d culture GGCTTCGGTC 231.7 0.2317 P8 GC+1d culture CTGTAGACTG 12.6 0.0126 P8 GC+1d culture GCTTCCGTCT 2.3 0.0023 P8 GC+1d culture AGCTTCGGTC 1.1 0.0011 P8 GC+1d culture GCTTCGGTCT 1.1 0.0011 P8 GC+1d culture GGTTTCGGTC 1.1 0.0011 P8 GC+1d culture TCATCTTCAG 1.1 0.0011 P8 GC+SHH+1d culture GGCTTCGGTC 293.9 0.2939 P8 GC+SHH+1d culture CTGTAGACTG 4.7 0.0047 P8 GC+SHH+1d culture GGCTTCGGCC (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCTTCGGTT 2.3 0.0023 P8 GC+SHH+1d culture TCATCTTCAG 2.3 0.0023 P8 GC+SHH+1d culture AGCTTCGGTC 1.2 0.0012 P8 GC+SHH+1d culture GCTTCCGTCT 1.2 0.0012 P8 GC+SHH+1d culture GGCTTTGGTC 1.2 0.0012 3T3 fibroblasts GGCTTCGGTC 543.3 0.5433 3T3 fibroblasts CTGTAGACTG 91.1 0.0911 3T3 fibroblasts CAAGAGCCCA 3.5 0.0035 3T3 fibroblasts GCTTCCGTCT 3.5 0.0035 3T3 fibroblasts GCTTCGGTCT 3.5 0.0035 3T3 fibroblasts GGCTTCGGCC (2) 3.5 0.0035 3T3 fibroblasts GGGCTTCGGT 3.5 0.0035 3T3 fibroblasts TCATCTTCAG 3.5 0.0035 E15 cortex GGCTTCGGTC 188 0.188 E15 cortex CTGTAGACTG 9.9 0.0099 E15 cortex GGGCTTCGGT 9.9 0.0099 E15 cortex TGCTTCGGTC 9.9 0.0099 E15 cortex AGCTTCGGTC 4.9 0.0049 E15 cortex GGATTCGGTC 4.9 0.0049 P1 cortex GGCTTCGGTC 127.3 0.1273 P1 cortex CTGTAGACTG 18.2 0.0182 P1 cortex AGCTTCGGTC 4.5 0.0045 Hypothalamus GGCTTCGGTC 327.8 0.3278 Hypothalamus TCATCTTCAG 34.4 0.0344 Hypothalamus GCTTCCGTCT 14.5 0.0145 Hypothalamus GCTTCGGTCT 7.2 0.0072 Hypothalamus CTGTAGACTG 5.4 0.0054 Hypothalamus AGCTTCGGTC 1.8 0.0018 Hypothalamus GGCCTTCGGT 1.8 0.0018 Hypothalamus GGCTTCGGCC (2) 1.8 0.0018 E12.5 retina GGCTTCGGTC 533.2 0.5332 E12.5 retina CTGTAGACTG 9.4 0.0094 E12.5 retina GCTTCGGTCT 7.5 0.0075 E12.5 retina GGCCTTCGGT 5.6 0.0056 E12.5 retina GGCTTTGGTC 5.6 0.0056 E12.5 retina TCATCTTCAG 3.8 0.0038 E12.5 retina CTGTAAACTG 1.9 0.0019 E12.5 retina GCTTCCGTCT 1.9 0.0019 E14.5 retina GGCTTCGGTC 322.5 0.3225 E14.5 retina TCATCTTCAG 23.7 0.0237 E14.5 retina GGCTTTGGTC 10.9 0.0109 E14.5 retina CTGTAGACTG 5.5 0.0055 E14.5 retina GGCTTCGGCC (2) 3.6 0.0036 E14.5 retina GCTTCCGTCT 1.8 0.0018 E14.5 retina GGCTTCGGTT 1.8 0.0018 E16.5 retina GGCTTCGGTC 384 0.384 E16.5 retina TCATCTTCAG 10.9 0.0109 E16.5 retina GGCCTTCGGT 3.6 0.0036 E16.5 retina CTGTAAACTG 1.8 0.0018 E16.5 retina GCTTCGGTCT 1.8 0.0018 E16.5 retina GGCTTCGGCC (2) 1.8 0.0018 E16.5 retina GGCTTCGGTT 1.8 0.0018 E18.5 retina GGCTTCGGTC 458.4 0.4584 E18.5 retina CTGTAGACTG 10.9 0.0109 E18.5 retina GGATTCGGTC 7.3 0.0073 E18.5 retina GGCTTCGGTT 5.5 0.0055 E18.5 retina CAAGAGCCCA 1.8 0.0018 E18.5 retina GCTTCGGTCT 1.8 0.0018 E18.5 retina GGCTTCGGCC (2) 1.8 0.0018 E18.5 retina TCATCTTCAG 1.8 0.0018 P0.5 retina GGCTTCGGTC 292.4 0.2924 P0.5 retina CTGTAGACTG 5.9 0.0059 P0.5 retina GGCTTCGGCC (2) 3.9 0.0039 P0.5 retina GGTTTCGGTC 3.9 0.0039 P0.5 retina TCATCTTCAG 3.9 0.0039 P0.5 retina GCTTCGGTCT 2 0.002 P2.5 retina GGCTTCGGTC 297.4 0.2974 P2.5 retina CTGTAGACTG 8.8 0.0088 P2.5 retina GGCTTCGGCC (2) 3.5 0.0035 P2.5 retina CAAGAGCCCA 1.8 0.0018 P2.5 retina GCTTCGGTCT 1.8 0.0018 P2.5 retina GGCCTTCGGT 1.8 0.0018 P2.5 retina GGCTTTGGTC 1.8 0.0018 P2.5 retina TCATCTTCAG 1.8 0.0018 P2.5 retina TGCTTCGGTC 1.8 0.0018 P4.5 retina GGCTTCGGTC 309.1 0.3091 P4.5 retina GGCTTTGGTC 4 0.004 P4.5 retina TCATCTTCAG 4 0.004 P4.5 retina GGCTTCGGCC (2) 2 0.002 P6.5 retina GGCTTCGGTC 221.8 0.2218 P6.5 retina CTGTAGACTG 5 0.005 P6.5 retina GGCTTCTTCT (2) 5 0.005 P6.5 retina CAAGAGCCCA 3.3 0.0033 P6.5 retina GGCCTTCGGT 1.7 0.0017 P6.5 retina GGCTTCGGTT 1.7 0.0017 P6.5 retina GGTTTCGGTC 1.7 0.0017 P6.5 retina TCATCTTCAG 1.7 0.0017 P6.5 retina TGCTTCGGTC 1.7 0.0017 P10.5 crx- retina GGCTTTGGTC 358.6 0.3586 P10.5 crx- retina TCATCTTCAG 13 0.013 P10.5 crx- retina GCTTCCGTCT 7.4 0.0074 P10.5 crx- retina CTGTAGACTG 5.6 0.0056 P10.5 crx- retina CAAGAGCCCA 3.7 0.0037 P10.5 crx- retina GGTTTCGTTT 3.7 0.0037 P10.5 crx- retina GGCTTCGGTC 1.9 0.0019 P10.5 crx- retina GGCTTTGGTT 1.9 0.0019 P10.5 crx+ retina GGCTTTGGTC 355.7 0.3557 P10.5 crx+ retina CTGTAGACTG 15.4 0.0154 P10.5 crx+ retina GGCTTTGGTT 3.8 0.0038 P10.5 crx+ retina TCATCTTCAG 3.8 0.0038 P10.5 crx+ retina CAAGAGCCCA 1.9 0.0019 P10.5 crx+ retina GGCTTCGGTC 1.9 0.0019 P10.5 crx+ retina GGTTTCGTTT 1.9 0.0019 Adult retinal GGCTTCGGTC 142.6 0.1426 Adult retinal GCTTCGGTCT 5.6 0.0056 Adult retinal GGGCTTCGGT 3.7 0.0037 Adult retinal CTGTAGACTG 1.9 0.0019 Adult retinal GGCTTTGGTC 1.9 0.0019 Adult retinal TCATCTTCAG 1.9 0.0019 ONL GGCTTCGGTC 93.9 0.0939 ONL GGCTTTGGTC 57.5 0.0575 ONL TCATCTTCAG 3.8 0.0038 ONL CTGTAGACTG 1.9 0.0019 ONL GGATTCGGTC 1.9 0.0019 ONL GGCTTTGGTT 1.9 0.0019