Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.315962	Pgam1	phosphoglycerate mutase 1	19	19 10.0 cM	18648
Gene Ontology	bisphosphoglycerate mutase activity | bisphosphoglycerate phosphatase activity | catalytic activity | cytosol | glycolysis | hydrolase activity | intramolecular transferase activity, phosphotransferases | isomerase activity | metabolism | phosphoglycerate mutase activity
Human Homolog	PGAM1[phosphoglycerate mutase 1 (brain)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCCAGCTGC 24.5 0.0245 P8 Cb GC CAGTTCTGGG (2) 1.6 0.0016 P8 Cb GC CTCCAGCTGC 1.6 0.0016 Cb medulloblastoma TTCCAGCTGC 69.4 0.0694 Cb medulloblastoma GTGATTTTTA 4.6 0.0046 Cb medulloblastoma TCAGAGTTTT 4.6 0.0046 Cb medulloblastoma CAGTTCTGGG (2) 2.3 0.0023 P8 GC+1d culture TTCCAGCTGC 25.1 0.0251 P8 GC+1d culture CTCCAGCTGC 1.1 0.0011 P8 GC+SHH+1d culture TTCCAGCTGC 42.2 0.0422 P8 GC+SHH+1d culture ATCCAGGGGT 1.2 0.0012 3T3 fibroblasts TTCCAGCTGC 52.6 0.0526 3T3 fibroblasts AGGTTACTTC 3.5 0.0035 3T3 fibroblasts CTCCAGCTGC 3.5 0.0035 3T3 fibroblasts GAGCCTGATC 3.5 0.0035 E15 cortex TTCCAGCTGC 19.8 0.0198 E15 cortex GAAGCTGAAC 4.9 0.0049 P1 cortex TTCCAGCTGC 9.1 0.0091 P1 cortex CTCCAGCTGC 4.5 0.0045 P1 cortex GAAGCTGAAC 4.5 0.0045 Hypothalamus TTCCAGCTGC 56.1 0.0561 Hypothalamus GAAGCTGTTG (3) 3.6 0.0036 Hypothalamus GTGATTTTTA 1.8 0.0018 E12.5 retina TTCCAGCTGC 60.1 0.0601 E12.5 retina AGGTTACTTC 5.6 0.0056 E12.5 retina ATCCAGGGGT 1.9 0.0019 E12.5 retina CTCCAGCTGC 1.9 0.0019 E12.5 retina GAAGCTGTTG (3) 1.9 0.0019 E12.5 retina GTGATTTTTA 1.9 0.0019 E14.5 retina TTCCAGCTGC 18.2 0.0182 E14.5 retina GAAGCTGAAC 7.3 0.0073 E14.5 retina GTGATTTTTA 3.6 0.0036 E14.5 retina CAGTCCTGGG (4) 1.8 0.0018 E14.5 retina GAGCCTGATC 1.8 0.0018 E16.5 retina TTCCAGCTGC 34.4 0.0344 E16.5 retina ATCCAGGGGT 3.6 0.0036 E16.5 retina GAAGCTGAAC 1.8 0.0018 E16.5 retina GCTGCCTACA (2) 1.8 0.0018 E18.5 retina TTCCAGCTGC 69.1 0.0691 E18.5 retina AGGTTACTTC 1.8 0.0018 E18.5 retina ATCCAGGGGT 1.8 0.0018 P0.5 retina TTCCAGCTGC 58.9 0.0589 P0.5 retina CAGTCCTGGG (4) 2 0.002 P0.5 retina CAGTTCTGGG (2) 2 0.002 P0.5 retina TCAGAGTTTT 2 0.002 P2.5 retina TTCCAGCTGC 49.3 0.0493 P2.5 retina ATCCAGGGGT 1.8 0.0018 P2.5 retina GAAGCTGAAC 1.8 0.0018 P4.5 retina TTCCAGCTGC 49.5 0.0495 P6.5 retina TTCCAGCTGC 78.4 0.0784 P10.5 crx- retina TTCCAGCTGC 44.6 0.0446 P10.5 crx- retina GAAGCTGAAC 1.9 0.0019 P10.5 crx- retina GAGCCTGATC 1.9 0.0019 P10.5 crx- retina GCTGCCTACA (2) 1.9 0.0019 P10.5 crx+ retina TTCCAGCTGC 86.5 0.0865 P10.5 crx+ retina AGGTTACTTC 5.8 0.0058 P10.5 crx+ retina CAGTCCTGGG (4) 1.9 0.0019 P10.5 crx+ retina GCTGCCTACA (2) 1.9 0.0019 Adult retinal TTCCAGCTGC 85.2 0.0852 Adult retinal AGGTTACTTC 1.9 0.0019 Adult retinal ATCCAGGGGT 1.9 0.0019 ONL TTCCAGCTGC 40.2 0.0402 ONL GAAGCTGAAC 21.1 0.0211